To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
Pillar Point
GBIF Taxonomic Comparison
To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
GBIF unique order: 156
GBIF unique order with NCBI ID: 156
GBIF unique order with eDNA match: 103
Taxon | GBIF Occurences | NCBI Match | eDNA Match |
---|---|---|---|
Normalized Taxa
Eukaryota, Animalia, Mollusca, Gastropoda, Nudibranchia GBIFAnimalia, Mollusca, Gastropoda, Nudibranchia GBIF ID: 980 NCBIEukaryota, Metazoa, Mollusca, Gastropoda, Nudibranchia NCBI ID: 70849, CALeDNA page |
5817 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Anthozoa, Actiniaria GBIFAnimalia, Cnidaria, Anthozoa, Actiniaria GBIF ID: 705 NCBIEukaryota, Metazoa, Cnidaria, Anthozoa, Actiniaria NCBI ID: 6103, CALeDNA page |
825 | ||
Normalized Taxa
Eukaryota, Animalia, Echinodermata, Asteroidea, Forcipulatida GBIFAnimalia, Echinodermata, Asteroidea, Forcipulatida GBIF ID: 1462 NCBIEukaryota, Metazoa, Echinodermata, Asteroidea, Forcipulatida NCBI ID: 7599, CALeDNA page |
749 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes GBIFAnimalia, Chordata, Aves, Charadriiformes GBIF ID: 7192402 NCBI |
481 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda GBIFAnimalia, Arthropoda, Malacostraca, Decapoda GBIF ID: 637 NCBIEukaryota, Metazoa, Arthropoda, Malacostraca, Decapoda NCBI ID: 6683, CALeDNA page |
479 | ||
Normalized Taxa
Eukaryota, Animalia, Mollusca, Polyplacophora, Chitonida GBIFAnimalia, Mollusca, Polyplacophora, Chitonida GBIF ID: 8278247 NCBIEukaryota, Metazoa, Mollusca, Polyplacophora, Neoloricata NCBI ID: 6652, CALeDNA page |
397 | ||
Normalized Taxa
Eukaryota, Animalia, Echinodermata, Asteroidea, Valvatida GBIFAnimalia, Echinodermata, Asteroidea, Valvatida GBIF ID: 810 NCBI |
397 | ||
Normalized Taxa
Eukaryota, Animalia, Mollusca, Gastropoda, Trochida GBIFAnimalia, Mollusca, Gastropoda, Trochida GBIF ID: 9715180 NCBI |
378 | ||
Normalized Taxa
Eukaryota, Animalia, Mollusca, Gastropoda, Neogastropoda GBIFAnimalia, Mollusca, Gastropoda, Neogastropoda GBIF ID: 982 NCBIEukaryota, Metazoa, Mollusca, Gastropoda, -- NCBI ID: 6479, CALeDNA page |
297 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Laminariales GBIFChromista, Ochrophyta, Phaeophyceae, Laminariales GBIF ID: 560 NCBIEukaryota, --, Phaeophyceae, --, Laminariales NCBI ID: 2886, CALeDNA page |
252 | ||
Normalized Taxa
Eukaryota, Animalia, Echinodermata, Echinoidea, Camarodonta GBIFAnimalia, Echinodermata, Echinoidea, Camarodonta GBIF ID: 5964707 NCBI |
238 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Pelecaniformes GBIFAnimalia, Chordata, Aves, Pelecaniformes GBIF ID: 7190953 NCBIEukaryota, Metazoa, Chordata, Aves, Pelecaniformes NCBI ID: 9205, CALeDNA page |
187 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes GBIFAnimalia, Chordata, Actinopterygii, Gasterosteiformes GBIF ID: 550 Animalia, Chordata, Actinopterygii, Perciformes GBIF ID: 587 Animalia, Chordata, Actinopterygii, Scorpaeniformes GBIF ID: 590 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Perciformes NCBI ID: 8111, CALeDNA page |
167 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Sessilia GBIFAnimalia, Arthropoda, Maxillopoda, Sessilia GBIF ID: 1426 NCBIEukaryota, Metazoa, Arthropoda, Maxillopoda, Sessilia NCBI ID: 116167, CALeDNA page |
154 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Anseriformes GBIFAnimalia, Chordata, Aves, Anseriformes GBIF ID: 1108 NCBI |
140 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Gigartinales GBIFPlantae, Rhodophyta, Florideophyceae, Gigartinales GBIF ID: 1400 GBIF ID: NULL NCBIEukaryota, --, --, Florideophyceae, Gigartinales NCBI ID: 28017, CALeDNA page |
125 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes GBIFAnimalia, Chordata, Aves, Passeriformes GBIF ID: 729 NCBI |
112 | ||
Normalized Taxa
Eukaryota, Animalia, Mollusca, Gastropoda, Lepetellida GBIFAnimalia, Mollusca, Gastropoda, Lepetellida GBIF ID: 9799313 NCBI |
112 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Carnivora GBIFAnimalia, Chordata, Mammalia, Carnivora GBIF ID: 732 NCBIEukaryota, Metazoa, Chordata, Mammalia, Carnivora NCBI ID: 33554, CALeDNA page |
105 | ||
Normalized Taxa
Eukaryota, Animalia, Mollusca, Gastropoda, Littorinimorpha GBIFAnimalia, Mollusca, Gastropoda, Littorinimorpha GBIF ID: 7390893 NCBIEukaryota, Metazoa, Mollusca, Gastropoda, -- NCBI ID: 216294, CALeDNA page |
103 | ||
Normalized Taxa
Eukaryota, Animalia, Mollusca, Cephalopoda, Octopoda GBIFAnimalia, Mollusca, Cephalopoda, Octopoda GBIF ID: 459 NCBI |
100 | ||
Normalized Taxa
Eukaryota, Animalia, Mollusca, Bivalvia, Veneroida GBIFAnimalia, Mollusca, Bivalvia, Venerida GBIF ID: 9310756 Animalia, Mollusca, Bivalvia, Cardiida GBIF ID: 9529005 Animalia, Mollusca, Bivalvia, Adapedonta GBIF ID: 9584178 NCBIEukaryota, Metazoa, Mollusca, Bivalvia, Veneroida NCBI ID: 6580, CALeDNA page |
95 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asterales GBIFPlantae, Tracheophyta, Magnoliopsida, Asterales GBIF ID: 414 NCBIEukaryota, Viridiplantae, Streptophyta, --, Asterales NCBI ID: 4209, CALeDNA page |
93 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Ceramiales GBIFPlantae, Rhodophyta, Florideophyceae, Ceramiales GBIF ID: 665 NCBIEukaryota, --, --, Florideophyceae, Ceramiales NCBI ID: 2802, CALeDNA page |
90 | ||
Normalized Taxa
Eukaryota, Animalia, Echinodermata, Ophiuroidea, Ophiurida GBIFAnimalia, Echinodermata, Ophiuroidea, Amphilepidida GBIF ID: 9661062 NCBI |
87 | ||
Normalized Taxa
Eukaryota, Animalia, Mollusca, Bivalvia, Mytilida GBIFAnimalia, Mollusca, Bivalvia, Mytilida GBIF ID: 9330464 NCBI |
82 | ||
Normalized Taxa
Eukaryota, Animalia, Mollusca, Bivalvia, Pectinida GBIFAnimalia, Mollusca, Bivalvia, Pectinida GBIF ID: 9250425 NCBI |
76 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Hydrozoa, Anthoathecata GBIFAnimalia, Cnidaria, Hydrozoa, Anthoathecata GBIF ID: 838 NCBIEukaryota, Metazoa, Cnidaria, Hydrozoa, Anthoathecata NCBI ID: 406427, CALeDNA page |
75 | ||
Normalized Taxa
Eukaryota, Animalia, Echinodermata, Asteroidea, Spinulosida GBIFAnimalia, Echinodermata, Asteroidea, Spinulosida GBIF ID: 1463 NCBI |
69 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Palmariales GBIFPlantae, Rhodophyta, Florideophyceae, Palmariales GBIF ID: 1403 NCBIEukaryota, --, --, Florideophyceae, Palmariales NCBI ID: 2819, CALeDNA page |
66 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Scalpelliformes GBIFAnimalia, Arthropoda, Maxillopoda, Pedunculata GBIF ID: 697 NCBI |
66 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Suliformes GBIFAnimalia, Chordata, Aves, Suliformes GBIF ID: 7192775 NCBI |
64 | ||
Normalized Taxa
Eukaryota, Animalia, Echinodermata, Holothuroidea, Dendrochirotida GBIFAnimalia, Echinodermata, Holothuroidea, Dendrochirotida GBIF ID: 1482 NCBIEukaryota, Metazoa, Echinodermata, Holothuroidea, Dendrochirotida NCBI ID: 7707, CALeDNA page |
57 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Podicipediformes GBIFAnimalia, Chordata, Aves, Podicipediformes GBIF ID: 7191588 NCBI |
56 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Gaviiformes GBIFAnimalia, Chordata, Aves, Gaviiformes GBIF ID: 7192754 NCBIEukaryota, Metazoa, Chordata, Aves, Gaviiformes NCBI ID: 30411, CALeDNA page |
56 | ||
Normalized Taxa
Eukaryota, Animalia, Bryozoa, Gymnolaemata, Cheilostomata GBIFAnimalia, Bryozoa, Gymnolaemata, Cheilostomatida GBIF ID: 467 NCBIEukaryota, Metazoa, Bryozoa, Gymnolaemata, Cheilostomatida NCBI ID: 10207, CALeDNA page |
44 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Anthozoa, Corallimorpharia GBIFAnimalia, Cnidaria, Anthozoa, Corallimorpharia GBIF ID: 1242 NCBIEukaryota, Metazoa, Cnidaria, Anthozoa, Corallimorpharia NCBI ID: 44295, CALeDNA page |
39 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Caryophyllales GBIFPlantae, Tracheophyta, Magnoliopsida, Caryophyllales GBIF ID: 422 NCBIEukaryota, Viridiplantae, Streptophyta, --, Caryophyllales NCBI ID: 3524, CALeDNA page |
38 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Alismatales GBIFPlantae, Tracheophyta, Liliopsida, Alismatales GBIF ID: 551 NCBIEukaryota, Viridiplantae, Streptophyta, Liliopsida, Alismatales NCBI ID: 16360, CALeDNA page |
34 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Lamiales GBIFPlantae, Tracheophyta, Magnoliopsida, Lamiales GBIF ID: 408 NCBI |
32 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Ascidiacea, Pleurogona GBIFAnimalia, Chordata, Ascidiacea, Stolidobranchia GBIF ID: 9469348 NCBI |
31 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Scyphozoa, Semaeostomeae GBIFAnimalia, Cnidaria, Scyphozoa, Semaeostomeae GBIF ID: 711 NCBIEukaryota, Metazoa, Cnidaria, Scyphozoa, Semaeostomeae NCBI ID: 6143, CALeDNA page |
31 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Phyllodocida GBIFAnimalia, Annelida, Polychaeta, Phyllodocida GBIF ID: 1079 NCBIEukaryota, Metazoa, Annelida, Polychaeta, Phyllodocida NCBI ID: 6348, CALeDNA page |
30 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Fucales GBIFChromista, Ochrophyta, Phaeophyceae, Fucales GBIF ID: 1182 NCBIEukaryota, --, Phaeophyceae, --, Fucales NCBI ID: 3009, CALeDNA page |
27 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Sabellida GBIFAnimalia, Annelida, Polychaeta, Sabellida GBIF ID: 1080 NCBIEukaryota, Metazoa, Annelida, Polychaeta, Sabellida NCBI ID: 6362, CALeDNA page |
27 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Fabales GBIFPlantae, Tracheophyta, Magnoliopsida, Fabales GBIF ID: 1370 NCBIEukaryota, Viridiplantae, Streptophyta, --, Fabales NCBI ID: 72025, CALeDNA page |
23 | ||
Normalized Taxa
Eukaryota, Animalia, Platyhelminthes, Polycladidea, Polycladida GBIFAnimalia, Platyhelminthes, Rhabditophora, Polycladida GBIF ID: 429 NCBIEukaryota, Metazoa, Platyhelminthes, --, Polycladida NCBI ID: 6163, CALeDNA page |
23 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Brassicales GBIFPlantae, Tracheophyta, Magnoliopsida, Brassicales GBIF ID: 7225535 NCBIEukaryota, Viridiplantae, Streptophyta, --, Brassicales NCBI ID: 3699, CALeDNA page |
21 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Blenniiformes GBIFAnimalia, Chordata, Actinopterygii, Gobiesociformes GBIF ID: 1163 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Blenniiformes NCBI ID: 1489921, CALeDNA page |
21 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Ectocarpales GBIFChromista, Ochrophyta, Phaeophyceae, Ectocarpales GBIF ID: 1181 Chromista, Ochrophyta, Phaeophyceae, Scytosiphonales GBIF ID: 1309 NCBIEukaryota, --, Phaeophyceae, --, Ectocarpales NCBI ID: 2877, CALeDNA page |
20 |