To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
Pillar Point
GBIF Taxonomic Comparison
To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
GBIF unique order: 156
GBIF unique order with NCBI ID: 156
GBIF unique order with eDNA match: 103
Taxon | GBIF Occurences | NCBI Match | eDNA Match |
---|---|---|---|
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Amphinomida GBIFAnimalia, Annelida, Polychaeta, Amphinomida GBIF ID: 864 NCBIEukaryota, Metazoa, Annelida, Polychaeta, Eunicida NCBI ID: 104701, CALeDNA page |
7 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Capitellida GBIFGBIF ID: NULL NCBIEukaryota, Metazoa, Annelida, Polychaeta, Capitellida NCBI ID: 6342, CALeDNA page |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Eunicida GBIFAnimalia, Annelida, Polychaeta, Eunicida GBIF ID: 865 NCBIEukaryota, Metazoa, Annelida, Polychaeta, Eunicida NCBI ID: 65495, CALeDNA page |
13 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Phyllodocida GBIFAnimalia, Annelida, Polychaeta, Phyllodocida GBIF ID: 1079 NCBIEukaryota, Metazoa, Annelida, Polychaeta, Phyllodocida NCBI ID: 6348, CALeDNA page |
30 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Sabellida GBIFAnimalia, Annelida, Polychaeta, Sabellida GBIF ID: 1080 NCBIEukaryota, Metazoa, Annelida, Polychaeta, Sabellida NCBI ID: 6362, CALeDNA page |
27 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Terebellida GBIFAnimalia, Annelida, Polychaeta, Terebellida GBIF ID: 475 NCBIEukaryota, Metazoa, Annelida, Polychaeta, Terebellida NCBI ID: 6373, CALeDNA page |
12 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Arachnida, Araneae GBIFAnimalia, Arthropoda, Arachnida, Araneae GBIF ID: 1496 NCBIEukaryota, Metazoa, Arthropoda, Arachnida, Araneae NCBI ID: 6893, CALeDNA page |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Arachnida, Trombidiformes GBIFAnimalia, Arthropoda, Arachnida, Prostigmata GBIF ID: 372 NCBIEukaryota, Metazoa, Arthropoda, Arachnida, Trombidiformes NCBI ID: 83136, CALeDNA page |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Blattodea GBIFAnimalia, Arthropoda, Insecta, Blattodea GBIF ID: 800 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Coleoptera GBIFAnimalia, Arthropoda, Insecta, Coleoptera GBIF ID: 1470 NCBIEukaryota, Metazoa, Arthropoda, Insecta, Coleoptera NCBI ID: 7041, CALeDNA page |
18 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Diptera GBIFAnimalia, Arthropoda, Insecta, Diptera GBIF ID: 811 NCBIEukaryota, Metazoa, Arthropoda, Insecta, Diptera NCBI ID: 7147, CALeDNA page |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Hemiptera GBIFAnimalia, Arthropoda, Insecta, Hemiptera GBIF ID: 809 NCBIEukaryota, Metazoa, Arthropoda, Insecta, Hemiptera NCBI ID: 7524, CALeDNA page |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Hymenoptera GBIFAnimalia, Arthropoda, Insecta, Hymenoptera GBIF ID: 1457 NCBIEukaryota, Metazoa, Arthropoda, Insecta, Hymenoptera NCBI ID: 7399, CALeDNA page |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Lepidoptera GBIFAnimalia, Arthropoda, Insecta, Lepidoptera GBIF ID: 797 NCBIEukaryota, Metazoa, Arthropoda, Insecta, Lepidoptera NCBI ID: 7088, CALeDNA page |
12 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Amphipoda GBIFAnimalia, Arthropoda, Malacostraca, Amphipoda GBIF ID: 1231 NCBIEukaryota, Metazoa, Arthropoda, Malacostraca, Amphipoda NCBI ID: 6821, CALeDNA page |
18 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda GBIFAnimalia, Arthropoda, Malacostraca, Decapoda GBIF ID: 637 NCBIEukaryota, Metazoa, Arthropoda, Malacostraca, Decapoda NCBI ID: 6683, CALeDNA page |
479 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Isopoda GBIFAnimalia, Arthropoda, Malacostraca, Isopoda GBIF ID: 643 NCBIEukaryota, Metazoa, Arthropoda, Malacostraca, Isopoda NCBI ID: 29979, CALeDNA page |
15 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Lepadiformes GBIFAnimalia, Arthropoda, Maxillopoda, Pedunculata GBIF ID: 697 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Scalpelliformes GBIFAnimalia, Arthropoda, Maxillopoda, Pedunculata GBIF ID: 697 NCBI |
66 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Sessilia GBIFAnimalia, Arthropoda, Maxillopoda, Sessilia GBIF ID: 1426 NCBIEukaryota, Metazoa, Arthropoda, Maxillopoda, Sessilia NCBI ID: 116167, CALeDNA page |
154 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Pycnogonida, Pantopoda GBIFAnimalia, Arthropoda, Pycnogonida, Pantopoda GBIF ID: 9477065 NCBIEukaryota, Metazoa, Arthropoda, Pycnogonida, Pantopoda NCBI ID: 373319, CALeDNA page |
7 | ||
Normalized Taxa
Eukaryota, Animalia, Bryozoa, Gymnolaemata, Cheilostomata GBIFAnimalia, Bryozoa, Gymnolaemata, Cheilostomatida GBIF ID: 467 NCBIEukaryota, Metazoa, Bryozoa, Gymnolaemata, Cheilostomatida NCBI ID: 10207, CALeDNA page |
44 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Amphibia, Caudata GBIFAnimalia, Chordata, Amphibia, Caudata GBIF ID: 953 NCBI |
8 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Ascidiacea, Enterogona GBIFAnimalia, Chordata, Ascidiacea, Aplousobranchia GBIF ID: 9589977 NCBIEukaryota, Metazoa, Chordata, Ascidiacea, Enterogona NCBI ID: 183770, CALeDNA page |
15 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Ascidiacea, Pleurogona GBIFAnimalia, Chordata, Ascidiacea, Stolidobranchia GBIF ID: 9469348 NCBI |
31 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Elasmobranchii, Carcharhiniformes GBIFAnimalia, Chordata, Elasmobranchii, Carcharhiniformes GBIF ID: 887 NCBIEukaryota, Metazoa, Chordata, Chondrichthyes, Carcharhiniformes NCBI ID: 30483, CALeDNA page |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Elasmobranchii, Myliobatiformes GBIFAnimalia, Chordata, Elasmobranchii, Myliobatiformes GBIF ID: 8214029 NCBIEukaryota, Metazoa, Chordata, Chondrichthyes, Myliobatiformes NCBI ID: 117851, CALeDNA page |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Elasmobranchii, Rajiformes GBIFAnimalia, Chordata, Elasmobranchii, Rajiformes GBIF ID: 884 Animalia, Chordata, Elasmobranchii, Rhinopristiformes GBIF ID: 9412443 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Holocephali, Chimaeriformes GBIFAnimalia, Chordata, Holocephali, Chimaeriformes GBIF ID: 880 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Carnivora GBIFAnimalia, Chordata, Mammalia, Carnivora GBIF ID: 732 NCBIEukaryota, Metazoa, Chordata, Mammalia, Carnivora NCBI ID: 33554, CALeDNA page |
105 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Cetacea GBIFAnimalia, Chordata, Mammalia, Cetacea GBIF ID: 733 NCBIEukaryota, Metazoa, Chordata, Mammalia, Cetacea NCBI ID: 9721, CALeDNA page |
9 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Lagomorpha GBIFAnimalia, Chordata, Mammalia, Lagomorpha GBIF ID: 785 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Rodentia GBIFAnimalia, Chordata, Mammalia, Rodentia GBIF ID: 1459 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Accipitriformes GBIFAnimalia, Chordata, Aves, Accipitriformes GBIF ID: 7191147 NCBI |
19 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Anseriformes GBIFAnimalia, Chordata, Aves, Anseriformes GBIF ID: 1108 NCBI |
140 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Apodiformes GBIFAnimalia, Chordata, Aves, Apodiformes GBIF ID: 1448 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes GBIFAnimalia, Chordata, Aves, Charadriiformes GBIF ID: 7192402 NCBI |
481 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Columbiformes GBIFAnimalia, Chordata, Aves, Columbiformes GBIF ID: 1446 NCBI |
12 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Coraciiformes GBIFAnimalia, Chordata, Aves, Coraciiformes GBIF ID: 1447 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Falconiformes GBIFAnimalia, Chordata, Aves, Falconiformes GBIF ID: 7191407 NCBIEukaryota, Metazoa, Chordata, Aves, Falconiformes NCBI ID: 8948, CALeDNA page |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Gaviiformes GBIFAnimalia, Chordata, Aves, Gaviiformes GBIF ID: 7192754 NCBIEukaryota, Metazoa, Chordata, Aves, Gaviiformes NCBI ID: 30411, CALeDNA page |
56 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Gruiformes GBIFAnimalia, Chordata, Aves, Gruiformes GBIF ID: 1493 NCBI |
8 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Inguania GBIFAnimalia, Chordata, Reptilia, Squamata GBIF ID: 715 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes GBIFAnimalia, Chordata, Aves, Passeriformes GBIF ID: 729 NCBI |
112 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Pelecaniformes GBIFAnimalia, Chordata, Aves, Pelecaniformes GBIF ID: 7190953 NCBIEukaryota, Metazoa, Chordata, Aves, Pelecaniformes NCBI ID: 9205, CALeDNA page |
187 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Piciformes GBIFAnimalia, Chordata, Aves, Piciformes GBIF ID: 724 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Podicipediformes GBIFAnimalia, Chordata, Aves, Podicipediformes GBIF ID: 7191588 NCBI |
56 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Procellariiformes GBIFAnimalia, Chordata, Aves, Procellariiformes GBIF ID: 7192755 NCBI |
7 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Serpentes GBIFAnimalia, Chordata, Reptilia, Squamata GBIF ID: 715 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Suliformes GBIFAnimalia, Chordata, Aves, Suliformes GBIF ID: 7192775 NCBI |
64 |