To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
Pillar Point
GBIF Taxonomic Comparison
To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
GBIF unique phylum: 19
GBIF unique phylum with NCBI ID: 19
GBIF unique phylum with eDNA match: 19
Taxon | GBIF Occurences | NCBI Match | eDNA Match |
---|---|---|---|
Normalized Taxa
Eukaryota, Animalia, Annelida GBIFAnimalia, Annelida GBIF ID: 42 NCBIEukaryota, Metazoa, Annelida NCBI ID: 6340, CALeDNA page |
92 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda GBIFAnimalia, Arthropoda GBIF ID: 54 NCBIEukaryota, Metazoa, Arthropoda NCBI ID: 6656, CALeDNA page |
785 | ||
Normalized Taxa
Eukaryota, Animalia, Bryozoa GBIFAnimalia, Bryozoa GBIF ID: 53 NCBIEukaryota, Metazoa, Bryozoa NCBI ID: 10205, CALeDNA page |
44 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata GBIFAnimalia, Chordata GBIF ID: 44 NCBIEukaryota, Metazoa, Chordata NCBI ID: 7711, CALeDNA page |
1551 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria GBIFAnimalia, Cnidaria GBIF ID: 43 NCBIEukaryota, Metazoa, Cnidaria NCBI ID: 6073, CALeDNA page |
983 | ||
Normalized Taxa
Eukaryota, Animalia, Echinodermata GBIFAnimalia, Echinodermata GBIF ID: 50 NCBIEukaryota, Metazoa, Echinodermata NCBI ID: 7586, CALeDNA page |
1601 | ||
Normalized Taxa
Eukaryota, Animalia, Mollusca GBIFAnimalia, Mollusca GBIF ID: 52 NCBIEukaryota, Metazoa, Mollusca NCBI ID: 6447, CALeDNA page |
7762 | ||
Normalized Taxa
Eukaryota, Animalia, Nemertea GBIFAnimalia, Nemertea GBIF ID: 63 NCBIEukaryota, Metazoa, Nemertea NCBI ID: 6217, CALeDNA page |
14 | ||
Normalized Taxa
Eukaryota, Animalia, Phoronida GBIFAnimalia, Phoronida GBIF ID: 19 NCBIEukaryota, Metazoa, Brachiopoda NCBI ID: 120557, CALeDNA page |
6 | ||
Normalized Taxa
Eukaryota, Animalia, Platyhelminthes GBIFAnimalia, Platyhelminthes GBIF ID: 108 NCBIEukaryota, Metazoa, Platyhelminthes NCBI ID: 6157, CALeDNA page |
23 | ||
Normalized Taxa
Eukaryota, Animalia, Porifera GBIFAnimalia, Porifera GBIF ID: 105 NCBIEukaryota, Metazoa, Porifera NCBI ID: 6040, CALeDNA page |
22 | ||
Normalized Taxa
Eukaryota, Animalia, Sipuncula GBIFAnimalia, Sipuncula GBIF ID: 74 NCBIEukaryota, Metazoa, Annelida NCBI ID: 6433, CALeDNA page |
14 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta GBIFChromista, Ochrophyta GBIF ID: 98 NCBI |
307 | ||
Normalized Taxa
Eukaryota, Fungi, Ascomycota GBIFFungi, Ascomycota GBIF ID: 95 NCBIEukaryota, Fungi, Ascomycota NCBI ID: 4890, CALeDNA page |
13 | ||
Normalized Taxa
Eukaryota, Fungi, Basidiomycota GBIFFungi, Basidiomycota GBIF ID: 34 NCBIEukaryota, Fungi, Basidiomycota NCBI ID: 5204, CALeDNA page |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Chlorophyta GBIFPlantae, Chlorophyta GBIF ID: 36 NCBIEukaryota, Viridiplantae, Chlorophyta NCBI ID: 3041, CALeDNA page |
41 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta GBIFPlantae, Rhodophyta GBIF ID: 106 GBIF ID: NULL NCBIEukaryota, --, -- NCBI ID: 2763, CALeDNA page |
349 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta GBIFPlantae, Tracheophyta GBIF ID: 7707728 NCBIEukaryota, Viridiplantae, Streptophyta NCBI ID: 58023, CALeDNA page |
315 | ||
Normalized Taxa
Eukaryota, Protozoa, Choanozoa GBIFFungi, Ascomycota GBIF ID: 95 NCBIEukaryota, --, -- NCBI ID: 28009, CALeDNA page |
1 |