Pillar Point

GBIF Taxonomic Comparison

To get a better understanding of the GBIF data, we examined the data at various taxonomic levels. By sorting the data by the number of occurrences, we found out  that sea slugs (order: Nudibranchia) made up 40% of the GBIF observations. Human observations usually tend to photograph animals.

To find out how eDNA complements GBIF data, we  looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species). 

GBIF unique phylum: 19

GBIF unique phylum with NCBI ID: 19

GBIF unique phylum with eDNA match: 19

Taxon GBIF Occurences NCBI Match eDNA Match
Normalized Taxa

Eukaryota, Animalia, Annelida

GBIF

Animalia, Annelida

GBIF ID: 42

NCBI

Eukaryota, Metazoa, Annelida

NCBI ID: 6340, CALeDNA page

92
Normalized Taxa

Eukaryota, Animalia, Arthropoda

GBIF

Animalia, Arthropoda

GBIF ID: 54

NCBI

Eukaryota, Metazoa, Arthropoda

NCBI ID: 6656, CALeDNA page

785
Normalized Taxa

Eukaryota, Animalia, Bryozoa

GBIF

Animalia, Bryozoa

GBIF ID: 53

NCBI

Eukaryota, Metazoa, Bryozoa

NCBI ID: 10205, CALeDNA page

44
Normalized Taxa

Eukaryota, Animalia, Chordata

GBIF

Animalia, Chordata

GBIF ID: 44

NCBI

Eukaryota, Metazoa, Chordata

NCBI ID: 7711, CALeDNA page

1551
Normalized Taxa

Eukaryota, Animalia, Cnidaria

GBIF

Animalia, Cnidaria

GBIF ID: 43

NCBI

Eukaryota, Metazoa, Cnidaria

NCBI ID: 6073, CALeDNA page

983
Normalized Taxa

Eukaryota, Animalia, Echinodermata

GBIF

Animalia, Echinodermata

GBIF ID: 50

NCBI

Eukaryota, Metazoa, Echinodermata

NCBI ID: 7586, CALeDNA page

1601
Normalized Taxa

Eukaryota, Animalia, Mollusca

GBIF

Animalia, Mollusca

GBIF ID: 52

NCBI

Eukaryota, Metazoa, Mollusca

NCBI ID: 6447, CALeDNA page

7762
Normalized Taxa

Eukaryota, Animalia, Nemertea

GBIF

Animalia, Nemertea

GBIF ID: 63

NCBI

Eukaryota, Metazoa, Nemertea

NCBI ID: 6217, CALeDNA page

14
Normalized Taxa

Eukaryota, Animalia, Phoronida

GBIF

Animalia, Phoronida

GBIF ID: 19

NCBI

Eukaryota, Metazoa, Brachiopoda

NCBI ID: 120557, CALeDNA page

6
Normalized Taxa

Eukaryota, Animalia, Platyhelminthes

GBIF

Animalia, Platyhelminthes

GBIF ID: 108

NCBI

Eukaryota, Metazoa, Platyhelminthes

NCBI ID: 6157, CALeDNA page

23
Normalized Taxa

Eukaryota, Animalia, Porifera

GBIF

Animalia, Porifera

GBIF ID: 105

NCBI

Eukaryota, Metazoa, Porifera

NCBI ID: 6040, CALeDNA page

22
Normalized Taxa

Eukaryota, Animalia, Sipuncula

GBIF

Animalia, Sipuncula

GBIF ID: 74

NCBI

Eukaryota, Metazoa, Annelida

NCBI ID: 6433, CALeDNA page

14
Normalized Taxa

Eukaryota, Chromista, Ochrophyta

GBIF

Chromista, Ochrophyta

GBIF ID: 98

NCBI
307
Normalized Taxa

Eukaryota, Fungi, Ascomycota

GBIF

Fungi, Ascomycota

GBIF ID: 95

NCBI

Eukaryota, Fungi, Ascomycota

NCBI ID: 4890, CALeDNA page

13
Normalized Taxa

Eukaryota, Fungi, Basidiomycota

GBIF

Fungi, Basidiomycota

GBIF ID: 34

NCBI

Eukaryota, Fungi, Basidiomycota

NCBI ID: 5204, CALeDNA page

1
Normalized Taxa

Eukaryota, Plantae, Chlorophyta

GBIF

Plantae, Chlorophyta

GBIF ID: 36

NCBI

Eukaryota, Viridiplantae, Chlorophyta

NCBI ID: 3041, CALeDNA page

41
Normalized Taxa

Eukaryota, Plantae, Rhodophyta

GBIF

Plantae, Rhodophyta

GBIF ID: 106

GBIF ID: NULL

NCBI

Eukaryota, --, --

NCBI ID: 2763, CALeDNA page

349
Normalized Taxa

Eukaryota, Plantae, Tracheophyta

GBIF

Plantae, Tracheophyta

GBIF ID: 7707728

NCBI

Eukaryota, Viridiplantae, Streptophyta

NCBI ID: 58023, CALeDNA page

315
Normalized Taxa

Eukaryota, Protozoa, Choanozoa

GBIF

Fungi, Ascomycota

GBIF ID: 95

NCBI

Eukaryota, --, --

NCBI ID: 28009, CALeDNA page

1