To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
Pillar Point
GBIF Taxonomic Comparison
To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
GBIF unique species: 726
GBIF unique species with NCBI ID: 622
GBIF unique species with eDNA match: 48
Taxon | GBIF Occurences | NCBI Match | eDNA Match |
---|---|---|---|
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Amphinomida, Amphinomidae, Pareurythoe, Pareurythoe californica GBIFAnimalia, Annelida, Polychaeta, Amphinomida, Amphinomidae, Pareurythoe, Pareurythoe californica GBIF ID: 2317736 NCBI |
7 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Capitellida, Arenicolidae, Arenicola, Arenicola cristata GBIFAnimalia, Annelida, Polychaeta, --, Arenicolidae, Arenicola, Arenicola cristata GBIF ID: 5197465 NCBIEukaryota, Metazoa, Annelida, Polychaeta, Capitellida, Arenicolidae, Arenicola, Arenicola cristata NCBI ID: 273048, CALeDNA page |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Capitellida, Capitellidae, Notomastus, Notomastus magnus GBIFAnimalia, Annelida, Polychaeta, --, Capitellidae, Notomastus, Notomastus magnus GBIF ID: 2318089 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Eunicida, Dorvilleidae, Dorvillea, Dorvillea moniloceras GBIFAnimalia, Annelida, Polychaeta, Eunicida, Dorvilleidae, Dorvillea, Dorvillea moniloceras GBIF ID: 5198042 NCBI |
13 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Phyllodocida, Glyceridae, Glycera, Glycera robusta GBIFAnimalia, Annelida, Polychaeta, Phyllodocida, Glyceridae, Glycera, Glycera robusta GBIF ID: 5195539 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Phyllodocida, Hesionidae, Oxydromus, Oxydromus pugettensis GBIFAnimalia, Annelida, Polychaeta, Phyllodocida, Hesionidae, Oxydromus, Oxydromus pugettensis GBIF ID: 7189822 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Phyllodocida, Nereididae, Alitta, Alitta brandti GBIFAnimalia, Annelida, Polychaeta, Phyllodocida, Nereididae, Alitta, Alitta brandti GBIF ID: 2316364 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Phyllodocida, Nereididae, Nereis, Nereis vexillosa GBIFAnimalia, Annelida, Polychaeta, Phyllodocida, Nereididae, Nereis, Nereis vexillosa GBIF ID: 5196263 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Phyllodocida, Nereididae, Platynereis, Platynereis bicanaliculata GBIFAnimalia, Annelida, Polychaeta, Phyllodocida, Nereididae, Platynereis, Platynereis bicanaliculata GBIF ID: 2315944 NCBIEukaryota, Metazoa, Annelida, Polychaeta, Phyllodocida, Nereididae, Platynereis, Platynereis bicanaliculata NCBI ID: 868042, CALeDNA page |
8 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Phyllodocida, Polynoidae, Arctonoe, Arctonoe fragilis GBIFAnimalia, Annelida, Polychaeta, Phyllodocida, Polynoidae, Arctonoe, Arctonoe fragilis GBIF ID: 2313794 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Phyllodocida, Polynoidae, Arctonoe, Arctonoe vittata GBIFAnimalia, Annelida, Polychaeta, Phyllodocida, Polynoidae, Arctonoe, Arctonoe vittata GBIF ID: 2313797 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Phyllodocida, Polynoidae, Halosydna, Halosydna brevisetosa GBIFAnimalia, Annelida, Polychaeta, Phyllodocida, Polynoidae, Halosydna, Halosydna brevisetosa GBIF ID: 2315083 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Phyllodocida, Polynoidae, Harmothoe, Harmothoe imbricata GBIFAnimalia, Annelida, Polychaeta, Phyllodocida, Polynoidae, Harmothoe, Harmothoe imbricata GBIF ID: 2313557 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Phyllodocida, Polynoidae, Hesperonoe, Hesperonoe complanata GBIFAnimalia, Annelida, Polychaeta, Phyllodocida, Polynoidae, Hesperonoe, Hesperonoe complanata GBIF ID: 2313351 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Phyllodocida, Syllidae, Odontosyllis, Odontosyllis phosphorea GBIFAnimalia, Annelida, Polychaeta, Phyllodocida, Syllidae, Odontosyllis, Odontosyllis phosphorea GBIF ID: 2309663 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Sabellida, Sabellariidae, Phragmatopoma, Phragmatopoma californica GBIFAnimalia, Annelida, Polychaeta, Sabellida, Sabellariidae, Phragmatopoma, Phragmatopoma californica GBIF ID: 2326465 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Sabellida, Sabellidae, Eudistylia, Eudistylia polymorpha GBIFAnimalia, Annelida, Polychaeta, Sabellida, Sabellidae, Eudistylia, Eudistylia polymorpha GBIF ID: 2329567 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Sabellida, Sabellidae, Pseudopotamilla, Pseudopotamilla occelata GBIFAnimalia, Annelida, Polychaeta, Sabellida, Sabellidae, Pseudopotamilla, Pseudopotamilla occelata GBIF ID: 2329250 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Sabellida, Sabellidae, Schizobranchia, Schizobranchia insignis GBIFAnimalia, Annelida, Polychaeta, Sabellida, Sabellidae, Schizobranchia, Schizobranchia insignis GBIF ID: 2329344 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Sabellida, Serpulidae, Salmacina, Salmacina tribranchiata GBIFAnimalia, Annelida, Polychaeta, Sabellida, Serpulidae, Salmacina, Salmacina tribranchiata GBIF ID: 2326669 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Sabellida, Serpulidae, Serpula, Serpula columbiana GBIFAnimalia, Annelida, Polychaeta, Sabellida, Serpulidae, Serpula, Serpula columbiana GBIF ID: 5199548 NCBI |
15 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Terebellida, Cirratulidae, Dodecaceria, Dodecaceria fewkesi GBIFAnimalia, Annelida, Polychaeta, Terebellida, Cirratulidae, Dodecaceria, Dodecaceria fewkesi GBIF ID: 2324123 NCBI |
8 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Terebellida, Terebellidae, Pista, Pista elongata GBIFAnimalia, Annelida, Polychaeta, Terebellida, Terebellidae, Pista, Pista elongata GBIF ID: 2324593 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Annelida, Polychaeta, Terebellida, Terebellidae, Pista, Pista pacifica GBIFAnimalia, Annelida, Polychaeta, Terebellida, Terebellidae, Pista, Pista pacifica GBIF ID: 2324611 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Arachnida, Araneae, Salticidae, Habronattus, Habronattus mustaciatus GBIFAnimalia, Arthropoda, Arachnida, Araneae, Salticidae, Habronattus, Habronattus mustaciatus GBIF ID: 2170718 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Arachnida, Trombidiformes, Bdellidae, Neomolgus, Neomolgus littoralis GBIFAnimalia, Arthropoda, Arachnida, Prostigmata, Bdellidae, Neomolgus, Neomolgus littoralis GBIF ID: 2180531 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Blattodea, Archotermopsidae, Zootermopsis, Zootermopsis angusticollis GBIFAnimalia, Arthropoda, Insecta, Blattodea, Archotermopsidae, Zootermopsis, Zootermopsis angusticollis GBIF ID: 2007393 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Coleoptera, Carabidae, Platynus, Platynus ovipennis GBIFAnimalia, Arthropoda, Insecta, Coleoptera, Carabidae, Platynus, Platynus ovipennis GBIF ID: 9807168 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Coleoptera, Chrysomelidae, Chrysolina, Chrysolina bankii GBIFAnimalia, Arthropoda, Insecta, Coleoptera, Chrysomelidae, Chrysolina, Chrysolina bankii GBIF ID: 4460057 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Coleoptera, Chrysomelidae, Diabrotica, Diabrotica undecimpunctata GBIFAnimalia, Arthropoda, Insecta, Coleoptera, Chrysomelidae, Diabrotica, Diabrotica undecimpunctata GBIF ID: 1048501 Animalia, Arthropoda, Insecta, Coleoptera, Chrysomelidae, Diabrotica, Diabrotica undecimpunctata GBIF ID: 7043287 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Coleoptera, Cleridae, Enoclerus, Enoclerus eximius GBIFAnimalia, Arthropoda, Insecta, Coleoptera, Cleridae, Enoclerus, Enoclerus eximius GBIF ID: 8086212 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Coleoptera, Coccinellidae, Coccinella, Coccinella septempunctata GBIFAnimalia, Arthropoda, Insecta, Coleoptera, Coccinellidae, Coccinella, Coccinella septempunctata GBIF ID: 4990191 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Diptera, Anthomyiidae, Fucellia, Fucellia rufitibia GBIFAnimalia, Arthropoda, Insecta, Diptera, Anthomyiidae, Fucellia, Fucellia rufitibia GBIF ID: 1573675 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Diptera, Coelopidae, Coelopa, Coelopa vanduzeei GBIFAnimalia, Arthropoda, Insecta, Diptera, Coelopidae, Coelopa, Coelopa vanduzeei GBIF ID: 1562101 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Hemiptera, Miridae, Closterotomus, Closterotomus norvegicus GBIFAnimalia, Arthropoda, Insecta, Hemiptera, Miridae, Closterotomus, Closterotomus norvegicus GBIF ID: 2011943 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Hymenoptera, Apidae, Bombus, Bombus melanopygus GBIFAnimalia, Arthropoda, Insecta, Hymenoptera, Apidae, Bombus, Bombus melanopygus GBIF ID: 1340518 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Hymenoptera, Apidae, Bombus, Bombus vosnesenskii GBIFAnimalia, Arthropoda, Insecta, Hymenoptera, Apidae, Bombus, Bombus vosnesenskii GBIF ID: 1340436 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Hymenoptera, Formicidae, Tapinoma, Tapinoma sessile GBIFAnimalia, Arthropoda, Insecta, Hymenoptera, Formicidae, Tapinoma, Tapinoma sessile GBIF ID: 1316799 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Hymenoptera, Vespidae, Dolichovespula, Dolichovespula maculata GBIFAnimalia, Arthropoda, Insecta, Hymenoptera, Vespidae, Dolichovespula, Dolichovespula maculata GBIF ID: 1311815 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Lepidoptera, Hesperiidae, Paratrytone, Paratrytone melane GBIFAnimalia, Arthropoda, Insecta, Lepidoptera, Hesperiidae, Paratrytone, Paratrytone melane GBIF ID: 4301459 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Lepidoptera, Lycaenidae, Brephidium, Brephidium exilis GBIFAnimalia, Arthropoda, Insecta, Lepidoptera, Lycaenidae, Brephidium, Brephidium exilis GBIF ID: 1932172 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Lepidoptera, Lycaenidae, Strymon, Strymon melinus GBIFAnimalia, Arthropoda, Insecta, Lepidoptera, Lycaenidae, Strymon, Strymon melinus GBIF ID: 1925429 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Lepidoptera, Nymphalidae, Phyciodes, Phyciodes tharos GBIFAnimalia, Arthropoda, Insecta, Lepidoptera, Nymphalidae, Phyciodes, Phyciodes tharos GBIF ID: 1918959 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Lepidoptera, Nymphalidae, Vanessa, Vanessa cardui GBIFAnimalia, Arthropoda, Insecta, Lepidoptera, Nymphalidae, Vanessa, Vanessa cardui GBIF ID: 4299368 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Lepidoptera, Pieridae, Pieris, Pieris rapae GBIFAnimalia, Arthropoda, Insecta, Lepidoptera, Pieridae, Pieris, Pieris rapae GBIF ID: 1920496 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Lepidoptera, Riodinidae, Fabricius, Vanessa annabella GBIFAnimalia, Arthropoda, Insecta, Lepidoptera, Riodinidae, Fabricius, Vanessa annabella GBIF ID: 5714369 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Insecta, Lepidoptera, Sphingidae, Hyles, Hyles lineata GBIFAnimalia, Arthropoda, Insecta, Lepidoptera, Sphingidae, Hyles, Hyles lineata GBIF ID: 1862841 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Amphipoda, Ampithoidae, Ampithoe, Ampithoe lacertosa GBIFAnimalia, Arthropoda, Malacostraca, Amphipoda, Ampithoidae, Ampithoe, Ampithoe lacertosa GBIF ID: 5177617 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Amphipoda, Talitridae, Megalorchestia, Megalorchestia californiana GBIFAnimalia, Arthropoda, Malacostraca, Amphipoda, Talitridae, Megalorchestia, Megalorchestia californiana GBIF ID: 2218549 NCBI |
17 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Albuneidae, Blepharipoda, Blepharipoda occidentalis GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Albuneidae, Blepharipoda, Blepharipoda occidentalis GBIF ID: 5178601 NCBI |
6 |