To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
Pillar Point
GBIF Taxonomic Comparison
To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
GBIF unique genus: 563
GBIF unique genus with NCBI ID: 538
GBIF unique genus with eDNA match: 93
Taxon | GBIF Occurences | NCBI Match | eDNA Match |
---|---|---|---|
Normalized Taxa
Eukaryota, Animalia, Mollusca, Polyplacophora, Chitonida, Ischnochitonidae, Stenoplax GBIFAnimalia, Mollusca, Polyplacophora, Chitonida, Ischnochitonidae, Stenoplax GBIF ID: 2306739 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Mollusca, Polyplacophora, Chitonida, Lepidochitonidae, Cyanoplax GBIFAnimalia, Mollusca, Polyplacophora, Chitonida, Lepidochitonidae, Cyanoplax GBIF ID: 4305102 NCBIEukaryota, Metazoa, Mollusca, Polyplacophora, Neoloricata, Lepidochitonidae, Cyanoplax NCBI ID: 413413, CALeDNA page |
6 | ||
Normalized Taxa
Eukaryota, Animalia, Mollusca, Polyplacophora, Chitonida, Lepidochitonidae, Nuttallina GBIFAnimalia, Mollusca, Polyplacophora, Chitonida, Lepidochitonidae, Nuttallina GBIF ID: 8845215 NCBI |
17 | ||
Normalized Taxa
Eukaryota, Animalia, Mollusca, Polyplacophora, Chitonida, Mopaliidae, Cryptochiton GBIFAnimalia, Mollusca, Polyplacophora, Chitonida, Mopaliidae, Cryptochiton GBIF ID: 2305879 NCBI |
88 | ||
Normalized Taxa
Eukaryota, Animalia, Mollusca, Polyplacophora, Chitonida, Mopaliidae, Dendrochiton GBIFAnimalia, Mollusca, Polyplacophora, Chitonida, Mopaliidae, Dendrochiton GBIF ID: 4305108 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Mollusca, Polyplacophora, Chitonida, Mopaliidae, Katharina GBIFAnimalia, Mollusca, Polyplacophora, Chitonida, Mopaliidae, Katharina GBIF ID: 2306018 NCBIEukaryota, Metazoa, Mollusca, Polyplacophora, Neoloricata, Mopaliidae, Katharina NCBI ID: 34586, CALeDNA page |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Mollusca, Polyplacophora, Chitonida, Mopaliidae, Mopalia GBIFAnimalia, Mollusca, Polyplacophora, Chitonida, Mopaliidae, Mopalia GBIF ID: 2306052 NCBIEukaryota, Metazoa, Mollusca, Polyplacophora, Neoloricata, Mopaliidae, Mopalia NCBI ID: 256103, CALeDNA page |
78 | ||
Normalized Taxa
Eukaryota, Animalia, Mollusca, Polyplacophora, Chitonida, Tonicellidae, Tonicella GBIFAnimalia, Mollusca, Polyplacophora, Chitonida, Tonicellidae, Tonicella GBIF ID: 2306809 NCBI |
127 | ||
Normalized Taxa
Eukaryota, Animalia, Nemertea, Anopla, Heteronemertea, Lineidae, Micrura GBIFAnimalia, Nemertea, Anopla, --, Lineidae, Micrura GBIF ID: 2507908 NCBIEukaryota, Metazoa, Nemertea, Anopla, Heteronemertea, Lineidae, Micrura NCBI ID: 88927, CALeDNA page |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Nemertea, Enopla, Monostilifera, Amphiporidae, Amphiporus GBIFAnimalia, Nemertea, Enopla, Monostilifera, Amphiporidae, Amphiporus GBIF ID: 2507489 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Nemertea, Enopla, Monostilifera, Emplectonematidae, Paranemertes GBIFAnimalia, Nemertea, Enopla, Monostilifera, Emplectonematidae, Paranemertes GBIF ID: 2507020 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Nemertea, Paleonemertea, Tubulanidae, Tubulanus GBIFAnimalia, Nemertea, Palaeonemertea, --, Tubulanidae, Tubulanus GBIF ID: 2508085 NCBIEukaryota, Metazoa, Nemertea, Palaeonemertea, --, Tubulanidae, Tubulanus NCBI ID: 88943, CALeDNA page |
8 | ||
Normalized Taxa
Eukaryota, Animalia, Phoronida, Phoronidae, Phoronis GBIFAnimalia, Phoronida, --, --, Phoronidae, Phoronis GBIF ID: 2269631 NCBIEukaryota, Metazoa, Brachiopoda, --, --, --, Phoronis NCBI ID: 33504, CALeDNA page |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Phoronida, Phoronidae, Phoronopsis GBIFAnimalia, Phoronida, --, --, Phoronidae, Phoronopsis GBIF ID: 2269649 NCBIEukaryota, Metazoa, Brachiopoda, --, --, --, Phoronopsis NCBI ID: 120318, CALeDNA page |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Platyhelminthes, Polycladidea, Polycladida, Callioplanidae, Kaburakia GBIFAnimalia, Platyhelminthes, Rhabditophora, Polycladida, Callioplanidae, Kaburakia GBIF ID: 2503271 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Platyhelminthes, Polycladidea, Polycladida, Notoplanidae, Notocomplana GBIFAnimalia, Platyhelminthes, Rhabditophora, Polycladida, Notoplanidae, Notocomplana GBIF ID: 4859771 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Platyhelminthes, Polycladidea, Polycladida, Pseudocerotidae, Pseudoceros GBIFAnimalia, Platyhelminthes, Rhabditophora, Polycladida, Pseudocerotidae, Pseudoceros GBIF ID: 2503240 NCBI |
12 | ||
Normalized Taxa
Eukaryota, Animalia, Platyhelminthes, Polycladidea, Polycladida, Stylochidae, Stylochus GBIFAnimalia, Platyhelminthes, Rhabditophora, Polycladida, Stylochidae, Stylochus GBIF ID: 2503276 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Animalia, Porifera, Calcarea, Leucosolenida, Amphoriscidae, Leucilla GBIFAnimalia, Porifera, Calcarea, Leucosolenida, Amphoriscidae, Leucilla GBIF ID: 2237455 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Porifera, Demospongiae, Dendroceratida, Darwinellidae, Aplysilla GBIFAnimalia, Porifera, Demospongiae, Dendroceratida, Darwinellidae, Aplysilla GBIF ID: 2238537 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Porifera, Demospongiae, Hadromerida, Clionaidae, Cliona GBIFAnimalia, Porifera, Demospongiae, Clionaida, Clionaidae, Cliona GBIF ID: 7464943 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Porifera, Demospongiae, Halichondrida, Halichondriidae, Halichondria GBIFAnimalia, Porifera, Demospongiae, Suberitida, Halichondriidae, Halichondria GBIF ID: 2241672 NCBIEukaryota, Metazoa, Porifera, Demospongiae, Suberitida, Halichondriidae, Halichondria NCBI ID: 6061, CALeDNA page |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Porifera, Demospongiae, Haplosclerida, Chalinidae, Haliclona GBIFAnimalia, Porifera, Demospongiae, Haplosclerida, Chalinidae, Haliclona GBIF ID: 5181969 NCBIEukaryota, Metazoa, Porifera, Demospongiae, Haplosclerida, Chalinidae, Haliclona NCBI ID: 6057, CALeDNA page |
10 | ||
Normalized Taxa
Eukaryota, Animalia, Sipuncula, Phascolosomatidea, Phascolosomatiformes, Phascolosomatidae, Phascolosoma GBIFAnimalia, Sipuncula, Phascolosomatidea, Phascolosomatiformes, Phascolosomatidae, Phascolosoma GBIF ID: 2509336 NCBI |
14 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Desmarestiales, Desmarestiaceae, Desmarestia GBIFChromista, Ochrophyta, Phaeophyceae, Desmarestiales, Desmarestiaceae, Desmarestia GBIF ID: 3200019 NCBIEukaryota, --, Phaeophyceae, --, Desmarestiales, Desmarestiaceae, Desmarestia NCBI ID: 31339, CALeDNA page |
8 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Ectocarpales, Chordariaceae, Analipus GBIFChromista, Ochrophyta, Phaeophyceae, Ectocarpales, Chordariaceae, Analipus GBIF ID: 3197899 Chromista, Ochrophyta, Phaeophyceae, Ectocarpales, Chordariaceae, Analipus GBIF ID: 8001223 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Ectocarpales, Chordariaceae, Cylindrocarpus GBIFChromista, Ochrophyta, Phaeophyceae, Ectocarpales, Chordariaceae, Cylindrocarpus GBIF ID: 3198956 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Ectocarpales, Chordariaceae, Haplogloia GBIFChromista, Ochrophyta, Phaeophyceae, Ectocarpales, Chordariaceae, Haplogloia GBIF ID: 3198032 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Ectocarpales, Chordariaceae, Leathesia GBIFChromista, Ochrophyta, Phaeophyceae, Ectocarpales, Chordariaceae, Leathesia GBIF ID: 3199204 NCBIEukaryota, --, Phaeophyceae, --, Ectocarpales, Chordariaceae, Leathesia NCBI ID: 27962, CALeDNA page |
3 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Ectocarpales, Scytosiphonaceae, Colpomenia GBIFChromista, Ochrophyta, Phaeophyceae, Scytosiphonales, Scytosiphonaceae, Colpomenia GBIF ID: 3197954 NCBIEukaryota, --, Phaeophyceae, --, Ectocarpales, Scytosiphonaceae, Colpomenia NCBI ID: 27964, CALeDNA page |
3 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Ectocarpales, Scytosiphonaceae, Scytosiphon GBIFChromista, Ochrophyta, Phaeophyceae, Scytosiphonales, Scytosiphonaceae, Scytosiphon GBIF ID: 3197993 NCBIEukaryota, --, Phaeophyceae, --, Ectocarpales, Scytosiphonaceae, Scytosiphon NCBI ID: 27966, CALeDNA page |
3 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Fucales, Fucaceae, Fucus GBIFChromista, Ochrophyta, Phaeophyceae, Fucales, Fucaceae, Fucus GBIF ID: 1010512 NCBIEukaryota, --, Phaeophyceae, --, Fucales, Fucaceae, Fucus NCBI ID: 3011, CALeDNA page |
2 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Fucales, Fucaceae, Pelvetiopsis GBIFChromista, Ochrophyta, Phaeophyceae, Fucales, Fucaceae, Pelvetiopsis GBIF ID: 3196508 NCBI |
7 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Fucales, Sargassaceae, Sargassum GBIFChromista, Ochrophyta, Phaeophyceae, Fucales, Sargassaceae, Sargassum GBIF ID: 3196548 NCBIEukaryota, --, Phaeophyceae, --, Fucales, Sargassaceae, Sargassum NCBI ID: 3015, CALeDNA page |
3 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Fucales, Sargassaceae, Stephanocystis GBIFChromista, Ochrophyta, Phaeophyceae, Fucales, Sargassaceae, Stephanocystis GBIF ID: 3197589 NCBI |
15 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Laminariales, Alariaceae, Alaria GBIFChromista, Ochrophyta, Phaeophyceae, Laminariales, Alariaceae, Alaria GBIF ID: 3196122 NCBIEukaryota, --, Phaeophyceae, --, Laminariales, Alariaceae, Alaria NCBI ID: 2888, CALeDNA page |
1 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Laminariales, Alariaceae, Pterygophora GBIFChromista, Ochrophyta, Phaeophyceae, Laminariales, Alariaceae, Pterygophora GBIF ID: 3196091 NCBI |
12 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Laminariales, Costariaceae, Costaria GBIFChromista, Ochrophyta, Phaeophyceae, Laminariales, Costariaceae, Costaria GBIF ID: 3196011 NCBI |
34 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Laminariales, Costariaceae, Dictyoneurum GBIFChromista, Ochrophyta, Phaeophyceae, Laminariales, Costariaceae, Dictyoneurum GBIF ID: 3195806 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Laminariales, Laminariaceae, Laminaria GBIFChromista, Ochrophyta, Phaeophyceae, Laminariales, Laminariaceae, Laminaria GBIF ID: 3195825 NCBI |
14 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Laminariales, Laminariaceae, Macrocystis GBIFChromista, Ochrophyta, Phaeophyceae, Laminariales, Laminariaceae, Macrocystis GBIF ID: 3195765 NCBIEukaryota, --, Phaeophyceae, --, Laminariales, Laminariaceae, Macrocystis NCBI ID: 35121, CALeDNA page |
21 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Laminariales, Laminariaceae, Nereocystis GBIFChromista, Ochrophyta, Phaeophyceae, Laminariales, Laminariaceae, Nereocystis GBIF ID: 3195802 NCBI |
41 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Laminariales, Laminariaceae, Postelsia GBIFChromista, Ochrophyta, Phaeophyceae, Laminariales, Laminariaceae, Postelsia GBIF ID: 3195817 NCBI |
44 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Laminariales, Lessoniaceae, Egregia GBIFChromista, Ochrophyta, Phaeophyceae, Laminariales, Lessoniaceae, Egregia GBIF ID: 3196087 NCBI |
84 | ||
Normalized Taxa
Eukaryota, Fungi, Ascomycota, Lecanoromycetes, Lecanorales, Parmeliaceae, Hypogymnia GBIFFungi, Ascomycota, Lecanoromycetes, Lecanorales, Parmeliaceae, Hypogymnia GBIF ID: 2606460 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Fungi, Ascomycota, Lecanoromycetes, Lecanorales, Ramalinaceae, Niebla GBIFFungi, Ascomycota, Lecanoromycetes, Lecanorales, Ramalinaceae, Niebla GBIF ID: 8360956 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Fungi, Ascomycota, Lecanoromycetes, Lecanorales, Ramalinaceae, Ramalina GBIFFungi, Ascomycota, Lecanoromycetes, Lecanorales, Ramalinaceae, Ramalina GBIF ID: 2521975 NCBI |
8 | ||
Normalized Taxa
Eukaryota, Fungi, Ascomycota, Lecanoromycetes, Peltigerales, Lobariaceae, Sticta GBIFFungi, Ascomycota, Lecanoromycetes, Peltigerales, Lobariaceae, Sticta GBIF ID: 2601351 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Fungi, Basidiomycota, Agaricomycetes, Agaricales, Agaricaceae, Agaricus GBIFFungi, Basidiomycota, Agaricomycetes, Agaricales, Agaricaceae, Agaricus GBIF ID: 2518646 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Chlorophyta, Ulvophyceae, Bryopsidales, Bryopsidaceae, Bryopsis GBIFPlantae, Chlorophyta, Ulvophyceae, Bryopsidales, Bryopsidaceae, Bryopsis GBIF ID: 2642534 NCBI |
1 |