To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
Pillar Point
GBIF Taxonomic Comparison
To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
GBIF unique species: 726
GBIF unique species with NCBI ID: 622
GBIF unique species with eDNA match: 48
Taxon | GBIF Occurences | NCBI Match | eDNA Match |
---|---|---|---|
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Scombridae, Scomber, Scomber japonicus GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Scombridae, Scomber, Scomber japonicus GBIF ID: 7599552 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Sebastidae, Sebastes, Sebastes auriculatus GBIFAnimalia, Chordata, Actinopterygii, Scorpaeniformes, Sebastidae, Sebastes, Sebastes auriculatus GBIF ID: 2335497 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Sebastidae, Sebastes, Sebastes caurinus GBIFAnimalia, Chordata, Actinopterygii, Scorpaeniformes, Sebastidae, Sebastes, Sebastes caurinus GBIF ID: 2335455 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Sebastidae, Sebastes, Sebastes melanops GBIFAnimalia, Chordata, Actinopterygii, Scorpaeniformes, Sebastidae, Sebastes, Sebastes melanops GBIF ID: 2335569 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Sebastidae, Sebastes, Sebastes paucispinis GBIFAnimalia, Chordata, Actinopterygii, Scorpaeniformes, Sebastidae, Sebastes, Sebastes paucispinis GBIF ID: 2335466 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Sebastidae, Sebastes, Sebastes pinniger GBIFAnimalia, Chordata, Actinopterygii, Scorpaeniformes, Sebastidae, Sebastes, Sebastes pinniger GBIF ID: 2335525 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Sebastidae, Sebastes, Sebastes rastrelliger GBIFAnimalia, Chordata, Actinopterygii, Scorpaeniformes, Sebastidae, Sebastes, Sebastes rastrelliger GBIF ID: 2335464 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Sebastidae, Sebastes, Sebastes serranoides GBIFAnimalia, Chordata, Actinopterygii, Scorpaeniformes, Sebastidae, Sebastes, Sebastes serranoides GBIF ID: 2335548 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Stichaeidae, Anoplarchus, Anoplarchus purpurescens GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Stichaeidae, Anoplarchus, Anoplarchus purpurescens GBIF ID: 2394914 Animalia, Chordata, Actinopterygii, Perciformes, Stichaeidae, Anoplarchus, Anoplarchus purpurescens GBIF ID: 6168714 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Perciformes, Stichaeidae, Anoplarchus, Anoplarchus purpurescens NCBI ID: 320623, CALeDNA page |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Stichaeidae, Cebidichthys, Cebidichthys violaceus GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Stichaeidae, Cebidichthys, Cebidichthys violaceus GBIF ID: 2394760 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Perciformes, Stichaeidae, Cebidichthys, Cebidichthys violaceus NCBI ID: 271503, CALeDNA page |
14 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Stichaeidae, Xiphister, Xiphister atropurpureus GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Stichaeidae, Xiphister, Xiphister atropurpureus GBIF ID: 2394813 Animalia, Chordata, Actinopterygii, Perciformes, Stichaeidae, Xiphister, Xiphister atropurpureus GBIF ID: 2394814 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Pleuronectiformes, Paralichthyidae, Citharichthys, Citharichthys sordidus GBIFAnimalia, Chordata, Actinopterygii, Pleuronectiformes, Paralichthyidae, Citharichthys, Citharichthys sordidus GBIF ID: 2408726 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Pleuronectiformes, Pleuronectidae, Parophrys, Parophrys vetulus GBIFAnimalia, Chordata, Actinopterygii, Pleuronectiformes, Pleuronectidae, Parophrys, Parophrys vetulus GBIF ID: 2409370 Animalia, Chordata, Actinopterygii, Pleuronectiformes, Pleuronectidae, Parophrys, Parophrys vetulus GBIF ID: 5214030 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Pleuronectiformes, Pleuronectidae, Pleuronichthys, Pleuronichthys coenosus GBIFAnimalia, Chordata, Actinopterygii, Pleuronectiformes, Pleuronectidae, Pleuronichthys, Pleuronichthys coenosus GBIF ID: 2409249 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Pleuronectiformes, Pleuronectidae, Pleuronichthys, Pleuronichthys decurrens GBIFAnimalia, Chordata, Actinopterygii, Pleuronectiformes, Pleuronectidae, Pleuronichthys, Pleuronichthys decurrens GBIF ID: 2409246 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Syngnathiformes, Syngnathidae, Syngnathus, Syngnathus californiensis GBIFAnimalia, Chordata, Actinopterygii, Syngnathiformes, Syngnathidae, Syngnathus, Syngnathus californiensis GBIF ID: 2332936 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Anthozoa, Actiniaria, Actiniidae, Anthopleura, Anthopleura artemisia GBIFAnimalia, Cnidaria, Anthozoa, Actiniaria, Actiniidae, Anthopleura, Anthopleura artemisia GBIF ID: 2256847 NCBI |
152 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Anthozoa, Actiniaria, Actiniidae, Anthopleura, Anthopleura elegantissima GBIFAnimalia, Cnidaria, Anthozoa, Actiniaria, Actiniidae, Anthopleura, Anthopleura elegantissima GBIF ID: 2256826 NCBIEukaryota, Metazoa, Cnidaria, Anthozoa, Actiniaria, Actiniidae, Anthopleura, Anthopleura elegantissima NCBI ID: 6110, CALeDNA page |
87 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Anthozoa, Actiniaria, Actiniidae, Anthopleura, Anthopleura sola GBIFAnimalia, Cnidaria, Anthozoa, Actiniaria, Actiniidae, Anthopleura, Anthopleura sola GBIF ID: 2256825 NCBI |
232 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Anthozoa, Actiniaria, Actiniidae, Anthopleura, Anthopleura xanthogrammica GBIFAnimalia, Cnidaria, Anthozoa, Actiniaria, Actiniidae, Anthopleura, Anthopleura xanthogrammica GBIF ID: 2256852 NCBI |
162 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Anthozoa, Actiniaria, Actiniidae, Epiactis, Epiactis prolifera GBIFAnimalia, Cnidaria, Anthozoa, Actiniaria, Actiniidae, Epiactis, Epiactis prolifera GBIF ID: 2256759 NCBI |
173 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Anthozoa, Actiniaria, Actiniidae, Urticina, Urticina coriacea GBIFAnimalia, Cnidaria, Anthozoa, Actiniaria, Actiniidae, Urticina, Urticina coriacea GBIF ID: 2256798 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Anthozoa, Actiniaria, Actiniidae, Urticina, Urticina grebelnyi GBIFAnimalia, Cnidaria, Anthozoa, Actiniaria, Actiniidae, Urticina, Urticina grebelnyi GBIF ID: 4339144 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Anthozoa, Actiniaria, Halcampidae, Halcampa, Halcampa crypta GBIFAnimalia, Cnidaria, Anthozoa, Actiniaria, Halcampidae, Halcampa, Halcampa crypta GBIF ID: 2257698 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Anthozoa, Actiniaria, Halcampidae, Halcampa, Halcampa decemtentaculata GBIFAnimalia, Cnidaria, Anthozoa, Actiniaria, Halcampidae, Halcampa, Halcampa decemtentaculata GBIF ID: 2257716 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Anthozoa, Actiniaria, Metridiidae, Metridium, Metridium dianthus GBIFAnimalia, Cnidaria, Anthozoa, Actiniaria, Metridiidae, Metridium, Metridium dianthus GBIF ID: 5183974 NCBI |
7 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Anthozoa, Alcyonacea, Alcyoniidae, Discophyton, Discophyton rudyi GBIFAnimalia, Cnidaria, Anthozoa, Alcyonacea, Alcyoniidae, Discophyton, Discophyton rudyi GBIF ID: 2263715 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Anthozoa, Alcyonacea, Alcyoniidae, Thrombophyton, Thrombophyton trachydermum GBIFAnimalia, Cnidaria, Anthozoa, Alcyonacea, Alcyoniidae, Thrombophyton, Thrombophyton trachydermum GBIF ID: 2263704 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Anthozoa, Corallimorpharia, Corallimorphidae, Corynactis, Corynactis californica GBIFAnimalia, Cnidaria, Anthozoa, Corallimorpharia, Corallimorphidae, Corynactis, Corynactis californica GBIF ID: 2260687 NCBI |
39 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Anthozoa, Scleractinia, Dendrophylliidae, Balanophyllia, Balanophyllia elegans GBIFAnimalia, Cnidaria, Anthozoa, Scleractinia, Dendrophylliidae, Balanophyllia, Balanophyllia elegans GBIF ID: 2259665 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Hydrozoa, Anthoathecata, Corynidae, Polyorchis, Polyorchis penicillatus GBIFAnimalia, Cnidaria, Hydrozoa, Anthoathecata, Corynidae, Polyorchis, Polyorchis penicillatus GBIF ID: 5185561 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Hydrozoa, Anthoathecata, Corynidae, Scrippsia, Scrippsia pacifica GBIFAnimalia, Cnidaria, Hydrozoa, Anthoathecata, Corynidae, Scrippsia, Scrippsia pacifica GBIF ID: 2265258 NCBI |
13 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Hydrozoa, Anthoathecata, Eudendriidae, Eudendrium, Eudendrium californicum GBIFAnimalia, Cnidaria, Hydrozoa, Anthoathecata, Eudendriidae, Eudendrium, Eudendrium californicum GBIF ID: 2266164 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Hydrozoa, Anthoathecata, Hydractiniidae, Schuchertinia, Schuchertinia milleri GBIFAnimalia, Cnidaria, Hydrozoa, Anthoathecata, Hydractiniidae, Schuchertinia, Schuchertinia milleri GBIF ID: 2265914 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Hydrozoa, Anthoathecata, Porpitidae, Velella, Velella velella GBIFAnimalia, Cnidaria, Hydrozoa, Anthoathecata, Porpitidae, Velella, Velella velella GBIF ID: 2265793 NCBIEukaryota, Metazoa, Cnidaria, Hydrozoa, Anthoathecata, Porpitidae, Velella, Velella velella NCBI ID: 264060, CALeDNA page |
18 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Hydrozoa, Anthoathecata, Stylasteridae, Stylantheca, Stylantheca papillosa GBIFAnimalia, Cnidaria, Hydrozoa, Anthoathecata, Stylasteridae, Stylantheca, Stylantheca papillosa GBIF ID: 2265301 NCBI |
39 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Hydrozoa, Anthoathecata, Tubulariidae, Ectopleura, Ectopleura marina GBIFAnimalia, Cnidaria, Hydrozoa, Anthoathecata, Tubulariidae, Ectopleura, Ectopleura marina GBIF ID: 2265644 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Hydrozoa, Leptothecata, Aglaopheniidae, Aglaophenia, Aglaophenia latirostris GBIFAnimalia, Cnidaria, Hydrozoa, Leptothecata, Aglaopheniidae, Aglaophenia, Aglaophenia latirostris GBIF ID: 2267384 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Scyphozoa, Semaeostomeae, Pelagiidae, Chrysaora, Chrysaora colorata GBIFAnimalia, Cnidaria, Scyphozoa, Semaeostomeae, Pelagiidae, Chrysaora, Chrysaora colorata GBIF ID: 5185419 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Scyphozoa, Semaeostomeae, Pelagiidae, Chrysaora, Chrysaora fuscescens GBIFAnimalia, Cnidaria, Scyphozoa, Semaeostomeae, Pelagiidae, Chrysaora, Chrysaora fuscescens GBIF ID: 5185415 NCBIEukaryota, Metazoa, Cnidaria, Scyphozoa, Semaeostomeae, Pelagiidae, Chrysaora, Chrysaora fuscescens NCBI ID: 880219, CALeDNA page |
14 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Scyphozoa, Semaeostomeae, Ulmaridae, Aurelia, Aurelia aurita GBIFAnimalia, Cnidaria, Scyphozoa, Semaeostomeae, Ulmaridae, Aurelia, Aurelia aurita GBIF ID: 2264442 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Scyphozoa, Semaeostomeae, Ulmaridae, Aurelia, Aurelia labiata GBIFAnimalia, Cnidaria, Scyphozoa, Semaeostomeae, Ulmaridae, Aurelia, Aurelia labiata GBIF ID: 5185432 NCBI |
13 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Scyphozoa, Semaeostomeae, Ulmaridae, Phacellophora, Phacellophora camtschatica GBIFAnimalia, Cnidaria, Scyphozoa, Semaeostomeae, Ulmaridae, Phacellophora, Phacellophora camtschatica GBIF ID: 2264449 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Echinodermata, Asteroidea, Forcipulatida, Asteriidae, Leptasterias, Leptasterias hexactis GBIFAnimalia, Echinodermata, Asteroidea, Forcipulatida, Asteriidae, Leptasterias, Leptasterias hexactis GBIF ID: 2273926 NCBI |
10 | ||
Normalized Taxa
Eukaryota, Animalia, Echinodermata, Asteroidea, Forcipulatida, Asteriidae, Pisaster, Pisaster brevispinus GBIFAnimalia, Echinodermata, Asteroidea, Forcipulatida, Asteriidae, Pisaster, Pisaster brevispinus GBIF ID: 2273749 NCBI |
13 | ||
Normalized Taxa
Eukaryota, Animalia, Echinodermata, Asteroidea, Forcipulatida, Asteriidae, Pisaster, Pisaster giganteus GBIFAnimalia, Echinodermata, Asteroidea, Forcipulatida, Asteriidae, Pisaster, Pisaster giganteus GBIF ID: 2273740 NCBI |
68 | ||
Normalized Taxa
Eukaryota, Animalia, Echinodermata, Asteroidea, Forcipulatida, Asteriidae, Pisaster, Pisaster ochraceus GBIFAnimalia, Echinodermata, Asteroidea, Forcipulatida, Asteriidae, Pisaster, Pisaster ochraceus GBIF ID: 2273754 NCBIEukaryota, Metazoa, Echinodermata, Asteroidea, Forcipulatida, Asteriidae, Pisaster, Pisaster ochraceus NCBI ID: 7612, CALeDNA page |
641 | ||
Normalized Taxa
Eukaryota, Animalia, Echinodermata, Asteroidea, Forcipulatida, Asteriidae, Pycnopodia, Pycnopodia helianthoides GBIFAnimalia, Echinodermata, Asteroidea, Forcipulatida, Asteriidae, Pycnopodia, Pycnopodia helianthoides GBIF ID: 2274565 NCBI |
15 | ||
Normalized Taxa
Eukaryota, Animalia, Echinodermata, Asteroidea, Spinulosida, Echinasteridae, Henricia, Henricia pumila GBIFAnimalia, Echinodermata, Asteroidea, Spinulosida, Echinasteridae, Henricia, Henricia pumila GBIF ID: 5187379 NCBI |
69 | ||
Normalized Taxa
Eukaryota, Animalia, Echinodermata, Asteroidea, Valvatida, Asterinidae, Patiria, Patiria miniata GBIFAnimalia, Echinodermata, Asteroidea, Valvatida, Asterinidae, Patiria, Patiria miniata GBIF ID: 2272172 NCBI |
107 |