To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
Pillar Point
GBIF Taxonomic Comparison
To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
GBIF unique family: 357
GBIF unique family with NCBI ID: 342
GBIF unique family with eDNA match: 127
Taxon | GBIF Occurences | NCBI Match | eDNA Match |
---|---|---|---|
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Bangiophyceae, Bangiales, Bangiaceae GBIFPlantae, Rhodophyta, Bangiophyceae, Bangiales, Bangiaceae GBIF ID: 8962 NCBIEukaryota, --, --, Bangiophyceae, Bangiales, Bangiaceae NCBI ID: 31345, CALeDNA page |
3 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Compsopogonophyceae, Erythropeltidales, Erythrotrichiaceae GBIFPlantae, Rhodophyta, Compsopogonophyceae, Erythropeltidales, Erythrotrichiaceae GBIF ID: 4886 NCBIEukaryota, --, --, Compsopogonophyceae, Erythropeltidales, Erythrotrichiaceae NCBI ID: 240428, CALeDNA page |
15 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Ceramiales, Callithamniaceae GBIFPlantae, Rhodophyta, Florideophyceae, Ceramiales, Callithamniaceae GBIF ID: 6453030 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Ceramiales, Ceramiaceae GBIFPlantae, Rhodophyta, Florideophyceae, Ceramiales, Ceramiaceae GBIF ID: 8968 NCBIEukaryota, --, --, Florideophyceae, Ceramiales, Ceramiaceae NCBI ID: 31377, CALeDNA page |
21 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Ceramiales, Delesseriaceae GBIFPlantae, Rhodophyta, Florideophyceae, Ceramiales, Delesseriaceae GBIF ID: 4894 NCBIEukaryota, --, --, Florideophyceae, Ceramiales, Delesseriaceae NCBI ID: 31386, CALeDNA page |
15 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Ceramiales, Rhodomelaceae GBIFPlantae, Rhodophyta, Florideophyceae, Ceramiales, Rhodomelaceae GBIF ID: 4895 NCBIEukaryota, --, --, Florideophyceae, Ceramiales, Rhodomelaceae NCBI ID: 2803, CALeDNA page |
35 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Ceramiales, Wrangeliaceae GBIFPlantae, Rhodophyta, Florideophyceae, Ceramiales, Wrangeliaceae GBIF ID: 5823953 NCBI |
13 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Corallinales, Corallinaceae GBIFPlantae, Rhodophyta, Florideophyceae, Corallinales, Corallinaceae GBIF ID: 4919 NCBIEukaryota, --, --, Florideophyceae, Corallinales, Corallinaceae NCBI ID: 31396, CALeDNA page |
3 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Corallinales, Hapalidiaceae GBIFPlantae, Rhodophyta, Florideophyceae, Corallinales, Hapalidiaceae GBIF ID: 4376199 NCBIEukaryota, --, --, Florideophyceae, Hapalidiales, Hapalidiaceae NCBI ID: 227970, CALeDNA page |
5 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Gigartinales, Dumontiaceae GBIFPlantae, Rhodophyta, Florideophyceae, Gigartinales, Dumontiaceae GBIF ID: 9001 NCBIEukaryota, --, --, Florideophyceae, Gigartinales, Dumontiaceae NCBI ID: 31415, CALeDNA page |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Gigartinales, Endocladiaceae GBIFPlantae, Rhodophyta, Florideophyceae, Gigartinales, Endocladiaceae GBIF ID: 9002 NCBIEukaryota, --, --, Florideophyceae, Gigartinales, Endocladiaceae NCBI ID: 2814, CALeDNA page |
14 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Gigartinales, Gigartinaceae GBIFPlantae, Rhodophyta, Florideophyceae, Gigartinales, Gigartinaceae GBIF ID: 9003 GBIF ID: NULL NCBIEukaryota, --, --, Florideophyceae, Gigartinales, Gigartinaceae NCBI ID: 29217, CALeDNA page |
69 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Gigartinales, Kallymeniaceae GBIFPlantae, Rhodophyta, Florideophyceae, Gigartinales, Kallymeniaceae GBIF ID: 4936 NCBIEukaryota, --, --, Florideophyceae, Gigartinales, Kallymeniaceae NCBI ID: 31430, CALeDNA page |
17 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Gigartinales, Phyllophoraceae GBIFPlantae, Rhodophyta, Florideophyceae, Gigartinales, Phyllophoraceae GBIF ID: 4941 NCBIEukaryota, --, --, Florideophyceae, Gigartinales, Phyllophoraceae NCBI ID: 28021, CALeDNA page |
16 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Gigartinales, Solieriaceae GBIFPlantae, Rhodophyta, Florideophyceae, Gigartinales, Solieriaceae GBIF ID: 3234991 NCBIEukaryota, --, --, Florideophyceae, Gigartinales, Solieriaceae NCBI ID: 31441, CALeDNA page |
8 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Gracilariales, Gracilariaceae GBIFPlantae, Rhodophyta, Florideophyceae, Gracilariales, Gracilariaceae GBIF ID: 4944 NCBIEukaryota, --, --, Florideophyceae, Gracilariales, Gracilariaceae NCBI ID: 31469, CALeDNA page |
3 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Halymeniales, Halymeniaceae GBIFPlantae, Rhodophyta, Florideophyceae, Halymeniales, Halymeniaceae GBIF ID: 9026 NCBIEukaryota, --, --, Florideophyceae, Halymeniales, Halymeniaceae NCBI ID: 31453, CALeDNA page |
7 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Nemaliales, Liagoraceae GBIFPlantae, Rhodophyta, Florideophyceae, Nemaliales, Liagoraceae GBIF ID: 4945 NCBIEukaryota, --, --, Florideophyceae, Nemaliales, Liagoraceae NCBI ID: 31484, CALeDNA page |
7 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Palmariales, Palmariaceae GBIFPlantae, Rhodophyta, Florideophyceae, Palmariales, Palmariaceae GBIF ID: 9030 NCBIEukaryota, --, --, Florideophyceae, Palmariales, Palmariaceae NCBI ID: 2820, CALeDNA page |
66 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Plocamiales, Plocamiaceae GBIFPlantae, Rhodophyta, Florideophyceae, Plocamiales, Plocamiaceae GBIF ID: 9033 NCBIEukaryota, --, --, Florideophyceae, Plocamiales, Plocamiaceae NCBI ID: 31450, CALeDNA page |
7 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Rhodymeniales, Champiaceae GBIFPlantae, Rhodophyta, Florideophyceae, Rhodymeniales, Champiaceae GBIF ID: 9034 NCBIEukaryota, --, --, Florideophyceae, Rhodymeniales, Champiaceae NCBI ID: 31497, CALeDNA page |
18 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Alismatales, Araceae GBIFPlantae, Tracheophyta, Liliopsida, Alismatales, Araceae GBIF ID: 6979 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Alismatales, Zosteraceae GBIFPlantae, Tracheophyta, Liliopsida, Alismatales, Zosteraceae GBIF ID: 3725 NCBIEukaryota, Viridiplantae, Streptophyta, Liliopsida, Alismatales, Zosteraceae NCBI ID: 27254, CALeDNA page |
30 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Apiales, Apiaceae GBIFPlantae, Tracheophyta, Magnoliopsida, Apiales, Apiaceae GBIF ID: 6720 NCBIEukaryota, Viridiplantae, Streptophyta, --, Apiales, Apiaceae NCBI ID: 4037, CALeDNA page |
14 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asparagales, Asparagaceae GBIFPlantae, Tracheophyta, Liliopsida, Asparagales, Asparagaceae GBIF ID: 7683 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae GBIFPlantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae GBIF ID: 3065 NCBIEukaryota, Viridiplantae, Streptophyta, --, Asterales, Asteraceae NCBI ID: 4210, CALeDNA page |
93 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Boraginales, Boraginaceae GBIFPlantae, Tracheophyta, Magnoliopsida, Boraginales, Boraginaceae GBIF ID: 2498 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Boraginales, Heliotropiaceae GBIFPlantae, Tracheophyta, Magnoliopsida, Boraginales, Heliotropiaceae GBIF ID: 4930387 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Brassicales, Brassicaceae GBIFPlantae, Tracheophyta, Magnoliopsida, Brassicales, Brassicaceae GBIF ID: 3112 NCBIEukaryota, Viridiplantae, Streptophyta, --, Brassicales, Brassicaceae NCBI ID: 3700, CALeDNA page |
18 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Brassicales, Tropaeolaceae GBIFPlantae, Tracheophyta, Magnoliopsida, Brassicales, Tropaeolaceae GBIF ID: 6696 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Caryophyllales, Aizoaceae GBIFPlantae, Tracheophyta, Magnoliopsida, Caryophyllales, Aizoaceae GBIF ID: 6752 NCBIEukaryota, Viridiplantae, Streptophyta, --, Caryophyllales, Aizoaceae NCBI ID: 3542, CALeDNA page |
9 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Caryophyllales, Amaranthaceae GBIFPlantae, Tracheophyta, Magnoliopsida, Caryophyllales, Amaranthaceae GBIF ID: 3064 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Caryophyllales, Nyctaginaceae GBIFPlantae, Tracheophyta, Magnoliopsida, Caryophyllales, Nyctaginaceae GBIF ID: 6718 NCBI |
15 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Caryophyllales, Polygonaceae GBIFPlantae, Tracheophyta, Magnoliopsida, Caryophyllales, Polygonaceae GBIF ID: 2416 NCBI |
10 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Cucurbitales, Cucurbitaceae GBIFPlantae, Tracheophyta, Magnoliopsida, Cucurbitales, Cucurbitaceae GBIF ID: 6634 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Dipsacales, Caprifoliaceae GBIFPlantae, Tracheophyta, Magnoliopsida, Dipsacales, Caprifoliaceae GBIF ID: 6710 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Ericales, Primulaceae GBIFPlantae, Tracheophyta, Magnoliopsida, Ericales, Primulaceae GBIF ID: 6674 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Fabales, Fabaceae GBIFPlantae, Tracheophyta, Magnoliopsida, Fabales, Fabaceae GBIF ID: 5386 NCBIEukaryota, Viridiplantae, Streptophyta, --, Fabales, Fabaceae NCBI ID: 3803, CALeDNA page |
23 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Geraniales, Geraniaceae GBIFPlantae, Tracheophyta, Magnoliopsida, Geraniales, Geraniaceae GBIF ID: 4676 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Lamiales, Orobanchaceae GBIFPlantae, Tracheophyta, Magnoliopsida, Lamiales, Orobanchaceae GBIF ID: 6651 NCBI |
11 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Lamiales, Phrymaceae GBIFPlantae, Tracheophyta, Magnoliopsida, Lamiales, Phrymaceae GBIF ID: 4194986 NCBI |
10 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Lamiales, Plantaginaceae GBIFPlantae, Tracheophyta, Magnoliopsida, Lamiales, Plantaginaceae GBIF ID: 2420 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Lamiales, Scrophulariaceae GBIFPlantae, Tracheophyta, Magnoliopsida, Lamiales, Scrophulariaceae GBIF ID: 2390 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Malvales, Malvaceae GBIFPlantae, Tracheophyta, Magnoliopsida, Malvales, Malvaceae GBIF ID: 6685 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Myrtales, Lythraceae GBIFPlantae, Tracheophyta, Magnoliopsida, Myrtales, Lythraceae GBIF ID: 6684 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Myrtales, Onagraceae GBIFPlantae, Tracheophyta, Magnoliopsida, Myrtales, Onagraceae GBIF ID: 2430 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Oxalidales, Oxalidaceae GBIFPlantae, Tracheophyta, Magnoliopsida, Oxalidales, Oxalidaceae GBIF ID: 6697 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Poales, Poaceae GBIFPlantae, Tracheophyta, Liliopsida, Poales, Poaceae GBIF ID: 3073 NCBIEukaryota, Viridiplantae, Streptophyta, Liliopsida, Poales, Poaceae NCBI ID: 4479, CALeDNA page |
13 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Ranunculales, Papaveraceae GBIFPlantae, Tracheophyta, Magnoliopsida, Ranunculales, Papaveraceae GBIF ID: 2422 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Rosales, Rhamnaceae GBIFPlantae, Tracheophyta, Magnoliopsida, Rosales, Rhamnaceae GBIF ID: 2407 NCBI |
2 |