To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
Pillar Point
GBIF Taxonomic Comparison
To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
GBIF unique species: 726
GBIF unique species with NCBI ID: 622
GBIF unique species with eDNA match: 48
Taxon | GBIF Occurences | NCBI Match | eDNA Match |
---|---|---|---|
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Procellariiformes, Diomedeidae, Phoebastria, Phoebastria nigripes GBIFAnimalia, Chordata, Aves, Procellariiformes, Diomedeidae, Phoebastria, Phoebastria nigripes GBIF ID: 2481383 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Procellariiformes, Procellariidae, Fulmarus, Fulmarus glacialis GBIFAnimalia, Chordata, Aves, Procellariiformes, Procellariidae, Fulmarus, Fulmarus glacialis GBIF ID: 2481433 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Procellariiformes, Procellariidae, Puffinus, Puffinus griseus GBIFAnimalia, Chordata, Aves, Procellariiformes, Procellariidae, Puffinus, Puffinus griseus GBIF ID: 8249990 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Serpentes, Natricidae, Thamnophis, Thamnophis elegans GBIFAnimalia, Chordata, Reptilia, Squamata, Natricidae, Thamnophis, Thamnophis elegans GBIF ID: 2457545 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Suliformes, Phalacrocoracidae, Phalacrocorax, Phalacrocorax auritus GBIFAnimalia, Chordata, Aves, Suliformes, Phalacrocoracidae, Phalacrocorax, Phalacrocorax auritus GBIF ID: 2481875 NCBI |
27 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Suliformes, Phalacrocoracidae, Phalacrocorax, Phalacrocorax pelagicus GBIFAnimalia, Chordata, Aves, Suliformes, Phalacrocoracidae, Phalacrocorax, Phalacrocorax pelagicus GBIF ID: 2481870 NCBIEukaryota, Metazoa, Chordata, Aves, Pelecaniformes, Phalacrocoracidae, Urile, Urile pelagicus NCBI ID: 56070, CALeDNA page |
12 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Suliformes, Phalacrocoracidae, Phalacrocorax, Phalacrocorax penicillatus GBIFAnimalia, Chordata, Aves, Suliformes, Phalacrocoracidae, Phalacrocorax, Phalacrocorax penicillatus GBIF ID: 2481892 NCBI |
9 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Suliformes, Sulidae, Morus, Morus bassanus GBIFAnimalia, Chordata, Aves, Suliformes, Sulidae, Morus, Morus bassanus GBIF ID: 2480964 NCBI |
9 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Suliformes, Sulidae, Sula, Sula sula GBIFAnimalia, Chordata, Aves, Suliformes, Sulidae, Sula, Sula sula GBIF ID: 2480972 NCBI |
7 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Atheriniformes, Atherinopsidae, Atherinops, Atherinops affinis GBIFAnimalia, Chordata, Actinopterygii, Atheriniformes, Atherinopsidae, Atherinops, Atherinops affinis GBIF ID: 2412419 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Aulopiformes, Alepisauridae, Alepisaurus, Alepisaurus ferox GBIFAnimalia, Chordata, Actinopterygii, Aulopiformes, Alepisauridae, Alepisaurus, Alepisaurus ferox GBIF ID: 2401692 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Batrachoidiformes, Batrachoididae, Porichthys, Porichthys notatus GBIFAnimalia, Chordata, Actinopterygii, Batrachoidiformes, Batrachoididae, Porichthys, Porichthys notatus GBIF ID: 2350817 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Blenniiformes, Gobiesocidae, Gobiesox, Gobiesox maeandricus GBIFAnimalia, Chordata, Actinopterygii, Gobiesociformes, Gobiesocidae, Gobiesox, Gobiesox maeandricus GBIF ID: 2411287 Animalia, Chordata, Actinopterygii, Gobiesociformes, Gobiesocidae, Gobiesox, Gobiesox maeandricus GBIF ID: 2411288 Animalia, Chordata, Actinopterygii, Gobiesociformes, Gobiesocidae, Gobiesox, Gobiesox maeandricus GBIF ID: 5214463 NCBI |
21 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Clupeiformes, Clupeidae, Clupea, Clupea pallasii GBIFAnimalia, Chordata, Actinopterygii, Clupeiformes, Clupeidae, Clupea, Clupea pallasii GBIF ID: 4284072 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Clupeiformes, Engraulidae, Engraulis, Engraulis mordax GBIFAnimalia, Chordata, Actinopterygii, Clupeiformes, Engraulidae, Engraulis, Engraulis mordax GBIF ID: 2414024 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Clupeiformes, Engraulidae, Engraulis, Engraulis mordax NCBI ID: 239368, CALeDNA page |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Gadiformes, Merlucciidae, Merluccius, Merluccius productus GBIFAnimalia, Chordata, Actinopterygii, Gadiformes, Merlucciidae, Merluccius, Merluccius productus GBIF ID: 2415676 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Gadiformes, Merlucciidae, Merluccius, Merluccius productus NCBI ID: 89952, CALeDNA page |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Lampridiformes, Lampridae, Lampris, Lampris guttatus GBIFAnimalia, Chordata, Actinopterygii, Lampriformes, Lampridae, Lampris, Lampris guttatus GBIF ID: 2400465 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Ophidiiformes, Bythitidae, Brosmophycis, Brosmophycis marginata GBIFAnimalia, Chordata, Actinopterygii, Ophidiiformes, Bythitidae, Brosmophycis, Brosmophycis marginata GBIF ID: 2346159 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Ophidiiformes, Ophidiidae, Chilara, Chilara taylori GBIFAnimalia, Chordata, Actinopterygii, Ophidiiformes, Ophidiidae, Chilara, Chilara taylori GBIF ID: 2345934 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Osmeriformes, Osmeridae, Spirinchus, Spirinchus starksi GBIFAnimalia, Chordata, Actinopterygii, Osmeriformes, Osmeridae, Spirinchus, Spirinchus starksi GBIF ID: 2410899 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Osmeriformes, Osmeridae, Spirinchus, Spirinchus starksi NCBI ID: 443727, CALeDNA page |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Aulorhynchidae, Aulorhynchus, Aulorhynchus flavidus GBIFAnimalia, Chordata, Actinopterygii, Gasterosteiformes, Aulorhynchidae, Aulorhynchus, Aulorhynchus flavidus GBIF ID: 2356481 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Clinidae, Gibbonsia, Gibbonsia metzi GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Clinidae, Gibbonsia, Gibbonsia metzi GBIF ID: 5209312 Animalia, Chordata, Actinopterygii, Perciformes, Clinidae, Gibbonsia, Gibbonsia metzi GBIF ID: 9130434 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Clinidae, Gibbonsia, Gibbonsia montereyensis GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Clinidae, Gibbonsia, Gibbonsia montereyensis GBIF ID: 5209308 Animalia, Chordata, Actinopterygii, Perciformes, Clinidae, Gibbonsia, Gibbonsia montereyensis GBIF ID: 5209309 Animalia, Chordata, Actinopterygii, Perciformes, Clinidae, Gibbonsia, Gibbonsia montereyensis GBIF ID: 5209310 Animalia, Chordata, Actinopterygii, Perciformes, Clinidae, Gibbonsia, Gibbonsia montereyensis GBIF ID: 9080682 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Blenniiformes, Clinidae, Gibbonsia, Gibbonsia montereyensis NCBI ID: 57803, CALeDNA page |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Clinidae, Heterostichus, Heterostichus rostratus GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Clinidae, Heterostichus, Heterostichus rostratus GBIF ID: 5209305 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Cottidae, Artedius, Artedius lateralis GBIFAnimalia, Chordata, Actinopterygii, Scorpaeniformes, Cottidae, Artedius, Artedius lateralis GBIF ID: 2333966 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Perciformes, Cottidae, Artedius, Artedius lateralis NCBI ID: 322683, CALeDNA page |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Cottidae, Ascelichthys, Ascelichthys rhodorus GBIFAnimalia, Chordata, Actinopterygii, Scorpaeniformes, Cottidae, Ascelichthys, Ascelichthys rhodorus GBIF ID: 2334021 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Cottidae, Clinocottus, Clinocottus acuticeps GBIFAnimalia, Chordata, Actinopterygii, Scorpaeniformes, Cottidae, Clinocottus, Clinocottus acuticeps GBIF ID: 2333873 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Cottidae, Clinocottus, Clinocottus analis GBIFAnimalia, Chordata, Actinopterygii, Scorpaeniformes, Cottidae, Clinocottus, Clinocottus analis GBIF ID: 2333868 Animalia, Chordata, Actinopterygii, Scorpaeniformes, Cottidae, Clinocottus, Clinocottus analis GBIF ID: 9177934 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Perciformes, Cottidae, Clinocottus, Clinocottus analis NCBI ID: 304258, CALeDNA page |
8 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Cottidae, Clinocottus, Clinocottus globiceps GBIFAnimalia, Chordata, Actinopterygii, Scorpaeniformes, Cottidae, Clinocottus, Clinocottus globiceps GBIF ID: 2333870 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Perciformes, Cottidae, Clinocottus, Clinocottus globiceps NCBI ID: 459047, CALeDNA page |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Cottidae, Clinocottus, Clinocottus recalvus GBIFAnimalia, Chordata, Actinopterygii, Scorpaeniformes, Cottidae, Clinocottus, Clinocottus recalvus GBIF ID: 2333866 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Cottidae, Enophrys, Enophrys bison GBIFAnimalia, Chordata, Actinopterygii, Scorpaeniformes, Cottidae, Enophrys, Enophrys bison GBIF ID: 5201188 NCBI |
12 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Cottidae, Leptocottus, Leptocottus armatus GBIFAnimalia, Chordata, Actinopterygii, Scorpaeniformes, Cottidae, Leptocottus, Leptocottus armatus GBIF ID: 2333923 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Perciformes, Cottidae, Leptocottus, Leptocottus armatus NCBI ID: 214925, CALeDNA page |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Cottidae, Oligocottus, Oligocottus maculosus GBIFAnimalia, Chordata, Actinopterygii, Scorpaeniformes, Cottidae, Oligocottus, Oligocottus maculosus GBIF ID: 2333746 NCBI |
24 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Cottidae, Oligocottus, Oligocottus rubellio GBIFAnimalia, Chordata, Actinopterygii, Scorpaeniformes, Cottidae, Oligocottus, Oligocottus rubellio GBIF ID: 2333740 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Cottidae, Oligocottus, Oligocottus snyderi GBIFAnimalia, Chordata, Actinopterygii, Scorpaeniformes, Cottidae, Oligocottus, Oligocottus snyderi GBIF ID: 2333742 NCBI |
9 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Cottidae, Scorpaenichthys, Scorpaenichthys marmoratus GBIFAnimalia, Chordata, Actinopterygii, Scorpaeniformes, Cottidae, Scorpaenichthys, Scorpaenichthys marmoratus GBIF ID: 7710276 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Perciformes, Cottidae, Scorpaenichthys, Scorpaenichthys marmoratus NCBI ID: 52273, CALeDNA page |
13 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Embiotocidae, Amphistichus, Amphistichus koelzi GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Embiotocidae, Amphistichus, Amphistichus koelzi GBIF ID: 2389258 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Embiotocidae, Cymatogaster, Cymatogaster aggregata GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Embiotocidae, Cymatogaster, Cymatogaster aggregata GBIF ID: 2389234 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Embiotocidae, Hyperprosopon, Hyperprosopon anale GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Embiotocidae, Hyperprosopon, Hyperprosopon anale GBIF ID: 2389299 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Embiotocidae, Hyperprosopon, Hyperprosopon argenteum GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Embiotocidae, Hyperprosopon, Hyperprosopon argenteum GBIF ID: 2389297 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Embiotocidae, Hyperprosopon, Hyperprosopon ellipticum GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Embiotocidae, Hyperprosopon, Hyperprosopon ellipticum GBIF ID: 2389301 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Embiotocidae, Micrometrus, Micrometrus aurora GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Embiotocidae, Micrometrus, Micrometrus aurora GBIF ID: 2389244 Animalia, Chordata, Actinopterygii, Perciformes, Embiotocidae, Micrometrus, Micrometrus aurora GBIF ID: 2389246 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Embiotocidae, Micrometrus, Micrometrus minimus GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Embiotocidae, Micrometrus, Micrometrus minimus GBIF ID: 2389240 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Gobiidae, Lepidogobius, Lepidogobius lepidus GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Gobiidae, Lepidogobius, Lepidogobius lepidus GBIF ID: 2379182 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Gobiidae, Rhinogobiops, Rhinogobiops nicholsii GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Gobiidae, Rhinogobiops, Rhinogobiops nicholsii GBIF ID: 2376639 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Hexagrammidae, Hexagrammos, Hexagrammos decagrammus GBIFAnimalia, Chordata, Actinopterygii, Scorpaeniformes, Hexagrammidae, Hexagrammos, Hexagrammos decagrammus GBIF ID: 2336472 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Hexagrammidae, Ophiodon, Ophiodon elongatus GBIFAnimalia, Chordata, Actinopterygii, Scorpaeniformes, Hexagrammidae, Ophiodon, Ophiodon elongatus GBIF ID: 2336521 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Perciformes, Hexagrammidae, Ophiodon, Ophiodon elongatus NCBI ID: 225387, CALeDNA page |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Pholidae, Apodichthys, Apodichthys flavidus GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Pholidae, Apodichthys, Apodichthys flavidus GBIF ID: 2390392 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Perciformes, Pholidae, Apodichthys, Apodichthys flavidus NCBI ID: 57779, CALeDNA page |
12 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Pholidae, Apodichthys, Apodichthys fucorum GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Pholidae, Apodichthys, Apodichthys fucorum GBIF ID: 2390390 Animalia, Chordata, Actinopterygii, Perciformes, Pholidae, Apodichthys, Apodichthys fucorum GBIF ID: 2390391 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Sciaenidae, Atractoscion, Atractoscion nobilis GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Sciaenidae, Atractoscion, Atractoscion nobilis GBIF ID: 2400364 NCBI |
1 |