To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
Pillar Point
GBIF Taxonomic Comparison
To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
GBIF unique genus: 563
GBIF unique genus with NCBI ID: 538
GBIF unique genus with eDNA match: 93
Taxon | GBIF Occurences | NCBI Match | eDNA Match |
---|---|---|---|
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Columbiformes, Columbidae, Streptopelia GBIFAnimalia, Chordata, Aves, Columbiformes, Columbidae, Streptopelia GBIF ID: 2495657 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Coraciiformes, Alcedinidae, Megaceryle GBIFAnimalia, Chordata, Aves, Coraciiformes, Alcedinidae, Megaceryle GBIF ID: 2475462 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Falconiformes, Falconidae, Falco GBIFAnimalia, Chordata, Aves, Falconiformes, Falconidae, Falco GBIF ID: 2480996 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Gaviiformes, Gaviidae, Gavia GBIFAnimalia, Chordata, Aves, Gaviiformes, Gaviidae, Gavia GBIF ID: 2481954 NCBIEukaryota, Metazoa, Chordata, Aves, Gaviiformes, Gaviidae, Gavia NCBI ID: 37038, CALeDNA page |
56 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Gruiformes, Rallidae, Fulica GBIFAnimalia, Chordata, Aves, Gruiformes, Rallidae, Fulica GBIF ID: 2474376 NCBI |
8 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Inguania, Phrynosomatidae, Sceloporus GBIFAnimalia, Chordata, Reptilia, Squamata, Phrynosomatidae, Sceloporus GBIF ID: 2451143 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Corvidae, Aphelocoma GBIFAnimalia, Chordata, Aves, Passeriformes, Corvidae, Aphelocoma GBIF ID: 2482394 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Corvidae, Corvus GBIFAnimalia, Chordata, Aves, Passeriformes, Corvidae, Corvus GBIF ID: 2482468 NCBI |
13 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Emberizidae, Melospiza GBIFAnimalia, Chordata, Aves, Passeriformes, Emberizidae, Melospiza GBIF ID: 2492191 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Emberizidae, Melozone GBIFAnimalia, Chordata, Aves, Passeriformes, Emberizidae, Melozone GBIF ID: 2491170 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Emberizidae, Molothrus GBIFAnimalia, Chordata, Aves, Passeriformes, Emberizidae, Molothrus GBIF ID: 2484385 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Emberizidae, Passerculus GBIFAnimalia, Chordata, Aves, Passeriformes, Emberizidae, Passerculus GBIF ID: 5231141 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Emberizidae, Pipilo GBIFAnimalia, Chordata, Aves, Passeriformes, Emberizidae, Pipilo GBIF ID: 2491204 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Emberizidae, Zonotrichia GBIFAnimalia, Chordata, Aves, Passeriformes, Emberizidae, Zonotrichia GBIF ID: 6173226 NCBI |
22 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Fringillidae, Haemorhous GBIFAnimalia, Chordata, Aves, Passeriformes, Fringillidae, Haemorhous GBIF ID: 4844128 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Fringillidae, Spinus GBIFAnimalia, Chordata, Aves, Passeriformes, Fringillidae, Spinus GBIF ID: 8051475 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Hirundinidae, Hirundo GBIFAnimalia, Chordata, Aves, Passeriformes, Hirundinidae, Hirundo GBIF ID: 2489222 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Icteridae, Euphagus GBIFAnimalia, Chordata, Aves, Passeriformes, Icteridae, Euphagus GBIF ID: 2484182 NCBI |
12 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Mimidae, Mimus GBIFAnimalia, Chordata, Aves, Passeriformes, Mimidae, Mimus GBIF ID: 9498764 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Muscicapidae, Turdus GBIFAnimalia, Chordata, Aves, Passeriformes, Muscicapidae, Turdus GBIF ID: 2490714 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Paridae, Poecile GBIFAnimalia, Chordata, Aves, Passeriformes, Paridae, Poecile GBIF ID: 2487782 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Parulidae, Cardellina GBIFAnimalia, Chordata, Aves, Passeriformes, Parulidae, Cardellina GBIF ID: 2489633 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Parulidae, Geothlypis GBIFAnimalia, Chordata, Aves, Passeriformes, Parulidae, Geothlypis GBIF ID: 2489637 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Parulidae, Setophaga GBIFAnimalia, Chordata, Aves, Passeriformes, Parulidae, Setophaga GBIF ID: 2489984 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Passeridae, Passer GBIFAnimalia, Chordata, Aves, Passeriformes, Passeridae, Passer GBIF ID: 2492321 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Regulidae, Regulus GBIFAnimalia, Chordata, Aves, Passeriformes, Regulidae, Regulus GBIF ID: 2484589 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Sittidae, Sitta GBIFAnimalia, Chordata, Aves, Passeriformes, Sittidae, Sitta GBIF ID: 2484878 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Sturnidae, Sturnus GBIFAnimalia, Chordata, Aves, Passeriformes, Sturnidae, Sturnus GBIF ID: 2489099 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Sturnidae, Toxostoma GBIFAnimalia, Chordata, Aves, Passeriformes, Sturnidae, Toxostoma GBIF ID: 2494943 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Troglodytidae, Thryomanes GBIFAnimalia, Chordata, Aves, Passeriformes, Troglodytidae, Thryomanes GBIF ID: 2493841 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Tyrannidae, Contopus GBIFAnimalia, Chordata, Aves, Passeriformes, Tyrannidae, Contopus GBIF ID: 2483729 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Tyrannidae, Empidonax GBIFAnimalia, Chordata, Aves, Passeriformes, Tyrannidae, Empidonax GBIF ID: 2482766 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Tyrannidae, Sayornis GBIFAnimalia, Chordata, Aves, Passeriformes, Tyrannidae, Sayornis GBIF ID: 2483605 NCBI |
13 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Tyrannidae, Tyrannus GBIFAnimalia, Chordata, Aves, Passeriformes, Tyrannidae, Tyrannus GBIF ID: 2483336 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Pelecaniformes, Ardeidae, Ardea GBIFAnimalia, Chordata, Aves, Pelecaniformes, Ardeidae, Ardea GBIF ID: 2480922 NCBI |
56 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Pelecaniformes, Ardeidae, Bubulcus GBIFAnimalia, Chordata, Aves, Pelecaniformes, Ardeidae, Bubulcus GBIF ID: 2480829 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Pelecaniformes, Ardeidae, Egretta GBIFAnimalia, Chordata, Aves, Pelecaniformes, Ardeidae, Egretta GBIF ID: 2480872 NCBI |
42 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Pelecaniformes, Ardeidae, Nycticorax GBIFAnimalia, Chordata, Aves, Pelecaniformes, Ardeidae, Nycticorax GBIF ID: 7824892 NCBI |
32 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Pelecaniformes, Pelecanidae, Pelecanus GBIFAnimalia, Chordata, Aves, Pelecaniformes, Pelecanidae, Pelecanus GBIF ID: 2480348 NCBI |
56 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Piciformes, Picidae, Colaptes GBIFAnimalia, Chordata, Aves, Piciformes, Picidae, Colaptes GBIF ID: 2478232 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Podicipediformes, Podicipedidae, Aechmophorus GBIFAnimalia, Chordata, Aves, Podicipediformes, Podicipedidae, Aechmophorus GBIF ID: 2482031 NCBI |
31 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Podicipediformes, Podicipedidae, Podiceps GBIFAnimalia, Chordata, Aves, Podicipediformes, Podicipedidae, Podiceps GBIF ID: 2482049 NCBI |
25 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Procellariiformes, Diomedeidae, Phoebastria GBIFAnimalia, Chordata, Aves, Procellariiformes, Diomedeidae, Phoebastria GBIF ID: 2481378 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Procellariiformes, Procellariidae, Fulmarus GBIFAnimalia, Chordata, Aves, Procellariiformes, Procellariidae, Fulmarus GBIF ID: 2481431 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Procellariiformes, Procellariidae, Puffinus GBIFAnimalia, Chordata, Aves, Procellariiformes, Procellariidae, Puffinus GBIF ID: 5229335 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Serpentes, Natricidae, Thamnophis GBIFAnimalia, Chordata, Reptilia, Squamata, Natricidae, Thamnophis GBIF ID: 2457825 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Suliformes, Phalacrocoracidae, Phalacrocorax GBIFAnimalia, Chordata, Aves, Suliformes, Phalacrocoracidae, Phalacrocorax GBIF ID: 2481854 NCBI |
48 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Suliformes, Sulidae, Morus GBIFAnimalia, Chordata, Aves, Suliformes, Sulidae, Morus GBIF ID: 2480962 NCBI |
9 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Suliformes, Sulidae, Sula GBIFAnimalia, Chordata, Aves, Suliformes, Sulidae, Sula GBIF ID: 2480966 NCBI |
7 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Atheriniformes, Atherinopsidae, Atherinops GBIFAnimalia, Chordata, Actinopterygii, Atheriniformes, Atherinopsidae, Atherinops GBIF ID: 2412418 NCBI |
3 |