To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
Pillar Point
GBIF Taxonomic Comparison
To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
GBIF unique genus: 563
GBIF unique genus with NCBI ID: 538
GBIF unique genus with eDNA match: 93
Taxon | GBIF Occurences | NCBI Match | eDNA Match |
---|---|---|---|
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Carnivora, Otariidae, Eumetopias GBIFAnimalia, Chordata, Mammalia, Carnivora, Otariidae, Eumetopias GBIF ID: 2433461 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Carnivora, Otariidae, Zalophus GBIFAnimalia, Chordata, Mammalia, Carnivora, Otariidae, Zalophus GBIF ID: 2433457 NCBI |
40 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Carnivora, Phocidae, Mirounga GBIFAnimalia, Chordata, Mammalia, Carnivora, Phocidae, Mirounga GBIF ID: 2434812 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Carnivora, Phocidae, Phoca GBIFAnimalia, Chordata, Mammalia, Carnivora, Phocidae, Phoca GBIF ID: 2433485 NCBIEukaryota, Metazoa, Chordata, Mammalia, Carnivora, Phocidae, Phoca NCBI ID: 9717, CALeDNA page |
52 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Cetacea, Delphinidae, Grampus GBIFAnimalia, Chordata, Mammalia, Cetacea, Delphinidae, Grampus GBIF ID: 5220026 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Cetacea, Delphinidae, Tursiops GBIFAnimalia, Chordata, Mammalia, Cetacea, Delphinidae, Tursiops GBIF ID: 2440446 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Cetacea, Eschrichtiidae, Eschrichtius GBIFAnimalia, Chordata, Mammalia, Cetacea, Eschrichtiidae, Eschrichtius GBIF ID: 2440703 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Cetacea, Phocoenidae, Phocoena GBIFAnimalia, Chordata, Mammalia, Cetacea, Phocoenidae, Phocoena GBIF ID: 2440664 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Lagomorpha, Leporidae, Sylvilagus GBIFAnimalia, Chordata, Mammalia, Lagomorpha, Leporidae, Sylvilagus GBIF ID: 2436839 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Rodentia, Cricetidae, Reithrodontomys GBIFAnimalia, Chordata, Mammalia, Rodentia, Cricetidae, Reithrodontomys GBIF ID: 2437854 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Rodentia, Geomyidae, Thomomys GBIFAnimalia, Chordata, Mammalia, Rodentia, Geomyidae, Thomomys GBIF ID: 2439381 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Accipitriformes, Accipitridae, Buteo GBIFAnimalia, Chordata, Aves, Accipitriformes, Accipitridae, Buteo GBIF ID: 2480517 NCBI |
15 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Accipitriformes, Cathartidae, Cathartes GBIFAnimalia, Chordata, Aves, Accipitriformes, Cathartidae, Cathartes GBIF ID: 2481927 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Anseriformes, Anatidae, Anas GBIFAnimalia, Chordata, Aves, Anseriformes, Anatidae, Anas GBIF ID: 2498056 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Anseriformes, Anatidae, Aythya GBIFAnimalia, Chordata, Aves, Anseriformes, Anatidae, Aythya GBIF ID: 2498254 NCBI |
7 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Anseriformes, Anatidae, Branta GBIFAnimalia, Chordata, Aves, Anseriformes, Anatidae, Branta GBIF ID: 2498190 NCBI |
33 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Anseriformes, Anatidae, Bucephala GBIFAnimalia, Chordata, Aves, Anseriformes, Anatidae, Bucephala GBIF ID: 2498324 NCBI |
41 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Anseriformes, Anatidae, Clangula GBIFAnimalia, Chordata, Aves, Anseriformes, Anatidae, Clangula GBIF ID: 2498272 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Anseriformes, Anatidae, Melanitta GBIFAnimalia, Chordata, Aves, Anseriformes, Anatidae, Melanitta GBIF ID: 2498237 NCBI |
33 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Anseriformes, Anatidae, Mergus GBIFAnimalia, Chordata, Aves, Anseriformes, Anatidae, Mergus GBIF ID: 2498368 NCBI |
19 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Apodiformes, Trochilidae, Calypte GBIFAnimalia, Chordata, Aves, Apodiformes, Trochilidae, Calypte GBIF ID: 2476673 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Alcidae, Cepphus GBIFAnimalia, Chordata, Aves, Charadriiformes, Alcidae, Cepphus GBIF ID: 3241982 NCBI |
13 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Alcidae, Cerorhinca GBIFAnimalia, Chordata, Aves, Charadriiformes, Alcidae, Cerorhinca GBIF ID: 2481323 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Alcidae, Fratercula GBIFAnimalia, Chordata, Aves, Charadriiformes, Alcidae, Fratercula GBIF ID: 2481352 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Alcidae, Synthliboramphus GBIFAnimalia, Chordata, Aves, Charadriiformes, Alcidae, Synthliboramphus GBIF ID: 2481347 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Alcidae, Uria GBIFAnimalia, Chordata, Aves, Charadriiformes, Alcidae, Uria GBIF ID: 2481338 NCBI |
19 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Charadriidae, Charadrius GBIFAnimalia, Chordata, Aves, Charadriiformes, Charadriidae, Charadrius GBIF ID: 2480277 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Charadriidae, Pluvialis GBIFAnimalia, Chordata, Aves, Charadriiformes, Charadriidae, Pluvialis GBIF ID: 2480326 NCBI |
27 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Haematopodidae, Haematopus GBIFAnimalia, Chordata, Aves, Charadriiformes, Haematopodidae, Haematopus GBIF ID: 2480260 NCBI |
45 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Chroicocephalus GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Chroicocephalus GBIF ID: 4848452 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Hydroprogne GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Hydroprogne GBIF ID: 2481219 NCBI |
17 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Larus GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Larus GBIF ID: 2481126 NCBI |
130 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Rissa GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Rissa GBIF ID: 2481203 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Rynchops GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Rynchops GBIF ID: 2481206 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Sterna GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Sterna GBIF ID: 2481227 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Thalasseus GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Thalasseus GBIF ID: 7735797 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Xema GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Xema GBIF ID: 2481220 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Actitis GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Actitis GBIF ID: 2481797 NCBI |
14 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Aphriza GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Aphriza GBIF ID: 2481806 NCBI |
13 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Arenaria GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Arenaria GBIF ID: 2481774 NCBI |
34 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Calidris GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Calidris GBIF ID: 2481739 NCBI |
42 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Catoptrophorus GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Catoptrophorus GBIF ID: 2481801 NCBI |
31 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Limnodromus GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Limnodromus GBIF ID: 2481669 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Limosa GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Limosa GBIF ID: 2481679 NCBI |
16 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Numenius GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Numenius GBIF ID: 7875964 NCBI |
20 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Phalaropus GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Phalaropus GBIF ID: 9549339 NCBI |
13 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Tringa GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Tringa GBIF ID: 2481709 NCBI |
12 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Stercorariidae, Stercorarius GBIFAnimalia, Chordata, Aves, Charadriiformes, Stercorariidae, Stercorarius GBIF ID: 2481608 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Columbiformes, Columbidae, Columba GBIFAnimalia, Chordata, Aves, Columbiformes, Columbidae, Columba GBIF ID: 2495404 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Columbiformes, Columbidae, Patagioenas GBIFAnimalia, Chordata, Aves, Columbiformes, Columbidae, Patagioenas GBIF ID: 2495265 NCBI |
1 |