To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
Pillar Point
GBIF Taxonomic Comparison
To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
GBIF unique family: 357
GBIF unique family with NCBI ID: 342
GBIF unique family with eDNA match: 127
Taxon | GBIF Occurences | NCBI Match | eDNA Match |
---|---|---|---|
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Corvidae GBIFAnimalia, Chordata, Aves, Passeriformes, Corvidae GBIF ID: 5235 NCBI |
14 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Emberizidae GBIFAnimalia, Chordata, Aves, Passeriformes, Emberizidae GBIF ID: 9608 NCBI |
34 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Fringillidae GBIFAnimalia, Chordata, Aves, Passeriformes, Fringillidae GBIF ID: 5242 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Hirundinidae GBIFAnimalia, Chordata, Aves, Passeriformes, Hirundinidae GBIF ID: 5248 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Icteridae GBIFAnimalia, Chordata, Aves, Passeriformes, Icteridae GBIF ID: 6176 NCBI |
12 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Mimidae GBIFAnimalia, Chordata, Aves, Passeriformes, Mimidae GBIF ID: 9321 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Muscicapidae GBIFAnimalia, Chordata, Aves, Passeriformes, Muscicapidae GBIF ID: 9322 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Paridae GBIFAnimalia, Chordata, Aves, Passeriformes, Paridae GBIF ID: 9327 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Parulidae GBIFAnimalia, Chordata, Aves, Passeriformes, Parulidae GBIF ID: 5263 NCBI |
11 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Passeridae GBIFAnimalia, Chordata, Aves, Passeriformes, Passeridae GBIF ID: 5264 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Regulidae GBIFAnimalia, Chordata, Aves, Passeriformes, Regulidae GBIF ID: 5279 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Sittidae GBIFAnimalia, Chordata, Aves, Passeriformes, Sittidae GBIF ID: 5283 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Sturnidae GBIFAnimalia, Chordata, Aves, Passeriformes, Sturnidae GBIF ID: 9350 NCBI |
7 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Troglodytidae GBIFAnimalia, Chordata, Aves, Passeriformes, Troglodytidae GBIF ID: 9355 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Tyrannidae GBIFAnimalia, Chordata, Aves, Passeriformes, Tyrannidae GBIF ID: 5291 NCBI |
19 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Pelecaniformes, Ardeidae GBIFAnimalia, Chordata, Aves, Pelecaniformes, Ardeidae GBIF ID: 3685 NCBI |
131 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Pelecaniformes, Pelecanidae GBIFAnimalia, Chordata, Aves, Pelecaniformes, Pelecanidae GBIF ID: 9329 NCBI |
56 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Piciformes, Picidae GBIFAnimalia, Chordata, Aves, Piciformes, Picidae GBIF ID: 9333 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Podicipediformes, Podicipedidae GBIFAnimalia, Chordata, Aves, Podicipediformes, Podicipedidae GBIF ID: 9338 NCBI |
56 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Procellariiformes, Diomedeidae GBIFAnimalia, Chordata, Aves, Procellariiformes, Diomedeidae GBIF ID: 5238 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Procellariiformes, Procellariidae GBIFAnimalia, Chordata, Aves, Procellariiformes, Procellariidae GBIF ID: 9339 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Serpentes, Natricidae GBIFAnimalia, Chordata, Reptilia, Squamata, Natricidae GBIF ID: 5789707 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Suliformes, Phalacrocoracidae GBIFAnimalia, Chordata, Aves, Suliformes, Phalacrocoracidae GBIF ID: 5268 NCBIEukaryota, Metazoa, Chordata, Aves, Pelecaniformes, Phalacrocoracidae NCBI ID: 9206, CALeDNA page |
48 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Suliformes, Sulidae GBIFAnimalia, Chordata, Aves, Suliformes, Sulidae GBIF ID: 9351 NCBI |
16 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Atheriniformes, Atherinopsidae GBIFAnimalia, Chordata, Actinopterygii, Atheriniformes, Atherinopsidae GBIF ID: 2957 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Atheriniformes, Atherinopsidae NCBI ID: 461499, CALeDNA page |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Aulopiformes, Alepisauridae GBIFAnimalia, Chordata, Actinopterygii, Aulopiformes, Alepisauridae GBIF ID: 7178 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Batrachoidiformes, Batrachoididae GBIFAnimalia, Chordata, Actinopterygii, Batrachoidiformes, Batrachoididae GBIF ID: 7187 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Blenniiformes, Gobiesocidae GBIFAnimalia, Chordata, Actinopterygii, Gobiesociformes, Gobiesocidae GBIF ID: 7668 NCBI |
21 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Clupeiformes, Clupeidae GBIFAnimalia, Chordata, Actinopterygii, Clupeiformes, Clupeidae GBIF ID: 7332 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Clupeiformes, Clupeidae NCBI ID: 55118, CALeDNA page |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Clupeiformes, Engraulidae GBIFAnimalia, Chordata, Actinopterygii, Clupeiformes, Engraulidae GBIF ID: 7334 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Clupeiformes, Engraulidae NCBI ID: 43062, CALeDNA page |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Gadiformes, Merlucciidae GBIFAnimalia, Chordata, Actinopterygii, Gadiformes, Merlucciidae GBIF ID: 3703 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Gadiformes, Merlucciidae NCBI ID: 8061, CALeDNA page |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Lampridiformes, Lampridae GBIFAnimalia, Chordata, Actinopterygii, Lampriformes, Lampridae GBIF ID: 7673 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Ophidiiformes, Bythitidae GBIFAnimalia, Chordata, Actinopterygii, Ophidiiformes, Bythitidae GBIF ID: 4220 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Ophidiiformes, Ophidiidae GBIFAnimalia, Chordata, Actinopterygii, Ophidiiformes, Ophidiidae GBIF ID: 8476 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Osmeriformes, Osmeridae GBIFAnimalia, Chordata, Actinopterygii, Osmeriformes, Osmeridae GBIF ID: 8480 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Osmeriformes, Osmeridae NCBI ID: 8012, CALeDNA page |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Aulorhynchidae GBIFAnimalia, Chordata, Actinopterygii, Gasterosteiformes, Aulorhynchidae GBIF ID: 3705 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Clinidae GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Clinidae GBIF ID: 4261 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Blenniiformes, Clinidae NCBI ID: 57768, CALeDNA page |
8 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Cottidae GBIFAnimalia, Chordata, Actinopterygii, Scorpaeniformes, Cottidae GBIF ID: 8621 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Perciformes, Cottidae NCBI ID: 8092, CALeDNA page |
80 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Embiotocidae GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Embiotocidae GBIF ID: 4269 NCBIEukaryota, Metazoa, Chordata, Actinopteri, --, Embiotocidae NCBI ID: 50791, CALeDNA page |
11 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Gobiidae GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Gobiidae GBIF ID: 4274 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Hexagrammidae GBIFAnimalia, Chordata, Actinopterygii, Scorpaeniformes, Hexagrammidae GBIF ID: 8626 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Perciformes, Hexagrammidae NCBI ID: 30983, CALeDNA page |
9 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Pholidae GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Pholidae GBIF ID: 8576 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Perciformes, Pholidae NCBI ID: 56724, CALeDNA page |
14 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Sciaenidae GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Sciaenidae GBIF ID: 5062 NCBIEukaryota, Metazoa, Chordata, Actinopteri, --, Sciaenidae NCBI ID: 30870, CALeDNA page |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Scombridae GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Scombridae GBIF ID: 8596 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Sebastidae GBIFAnimalia, Chordata, Actinopterygii, Scorpaeniformes, Sebastidae GBIF ID: 8633 NCBI |
14 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Perciformes, Stichaeidae GBIFAnimalia, Chordata, Actinopterygii, Perciformes, Stichaeidae GBIF ID: 8598 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Perciformes, Stichaeidae NCBI ID: 30892, CALeDNA page |
25 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Pleuronectiformes, Paralichthyidae GBIFAnimalia, Chordata, Actinopterygii, Pleuronectiformes, Paralichthyidae GBIF ID: 5082 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Pleuronectiformes, Paralichthyidae NCBI ID: 171414, CALeDNA page |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Pleuronectiformes, Pleuronectidae GBIFAnimalia, Chordata, Actinopterygii, Pleuronectiformes, Pleuronectidae GBIF ID: 8611 NCBIEukaryota, Metazoa, Chordata, Actinopteri, Pleuronectiformes, Pleuronectidae NCBI ID: 8256, CALeDNA page |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Teleostei, Syngnathiformes, Syngnathidae GBIFAnimalia, Chordata, Actinopterygii, Syngnathiformes, Syngnathidae GBIF ID: 5901 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Cnidaria, Anthozoa, Actiniaria, Actiniidae GBIFAnimalia, Cnidaria, Anthozoa, Actiniaria, Actiniidae GBIF ID: 5688 NCBIEukaryota, Metazoa, Cnidaria, Anthozoa, Actiniaria, Actiniidae NCBI ID: 42822, CALeDNA page |
812 |