To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
Pillar Point
GBIF Taxonomic Comparison
To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
GBIF unique genus: 563
GBIF unique genus with NCBI ID: 538
GBIF unique genus with eDNA match: 93
Taxon | GBIF Occurences | NCBI Match | eDNA Match |
---|---|---|---|
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Callianassidae, Neotrypaea GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Callianassidae, Neotrypaea GBIF ID: 2222876 NCBIEukaryota, Metazoa, Arthropoda, Malacostraca, Decapoda, Callianassidae, Neotrypaea NCBI ID: 177237, CALeDNA page |
11 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Dacryopilumnidae, Pachygrapsus GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Dacryopilumnidae, Pachygrapsus GBIF ID: 2225808 NCBI |
63 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Dromiidae, Cancer GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Dromiidae, Cancer GBIF ID: 2204488 NCBI |
54 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Dromiidae, Metacarcinus GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Dromiidae, Metacarcinus GBIF ID: 4644227 NCBI |
10 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Dromiidae, Romaleon GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Dromiidae, Romaleon GBIF ID: 3254289 NCBI |
86 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Galatheidae, Pleuroncodes GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Galatheidae, Pleuroncodes GBIF ID: 2222706 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Hippidae, Emerita GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Hippidae, Emerita GBIF ID: 2225695 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Hippolytidae, Heptacarpus GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Hippolytidae, Heptacarpus GBIF ID: 2226436 NCBI |
8 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Hippolytidae, Spirontocaris GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Hippolytidae, Spirontocaris GBIF ID: 2226295 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Lithodidae, Lopholithodes GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Lithodidae, Lopholithodes GBIF ID: 2224373 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Ocypodidae, Pugettia GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Ocypodidae, Pugettia GBIF ID: 2226670 NCBI |
118 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Paguridae, Pagurus GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Paguridae, Pagurus GBIF ID: 2224189 NCBI |
38 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Paguridae, Phimochirus GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Paguridae, Phimochirus GBIF ID: 2224135 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Porcellanidae, Pachycheles GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Porcellanidae, Pachycheles GBIF ID: 2222722 NCBI |
15 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Porcellanidae, Petrolisthes GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Porcellanidae, Petrolisthes GBIF ID: 2222708 NCBI |
25 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Pseudothelphusidae, Hemigrapsus GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Pseudothelphusidae, Hemigrapsus GBIF ID: 2225769 NCBI |
23 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Isopoda, Arcturidae, Idarcturus GBIFAnimalia, Arthropoda, Malacostraca, Isopoda, Arcturidae, Idarcturus GBIF ID: 2199219 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Isopoda, Idoteidae, Idotea GBIFAnimalia, Arthropoda, Malacostraca, Isopoda, Idoteidae, Idotea GBIF ID: 2201390 NCBI |
7 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Isopoda, Idoteidae, Pentidotea GBIFAnimalia, Arthropoda, Malacostraca, Isopoda, Idoteidae, Pentidotea GBIF ID: 2204871 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Isopoda, Ligiidae, Ligia GBIFAnimalia, Arthropoda, Malacostraca, Isopoda, Ligiidae, Ligia GBIF ID: 2201501 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Lepadiformes, Lepadidae, Lepas GBIFAnimalia, Arthropoda, Maxillopoda, Pedunculata, Lepadidae, Lepas GBIF ID: 2113849 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Scalpelliformes, Pollicipedidae, Pollicipes GBIFAnimalia, Arthropoda, Maxillopoda, Pedunculata, Pollicipedidae, Pollicipes GBIF ID: 2113806 NCBIEukaryota, Metazoa, Arthropoda, Maxillopoda, Pedunculata, Pollicipedidae, Pollicipes NCBI ID: 36136, CALeDNA page |
66 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Sessilia, Archaeobalanidae, Semibalanus GBIFAnimalia, Arthropoda, Maxillopoda, Sessilia, Archaeobalanidae, Semibalanus GBIF ID: 2115783 NCBI |
13 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Sessilia, Balanidae, Balanus GBIFAnimalia, Arthropoda, Maxillopoda, Sessilia, Balanidae, Balanus GBIF ID: 2115691 NCBIEukaryota, Metazoa, Arthropoda, Maxillopoda, Sessilia, Balanidae, Balanus NCBI ID: 6677, CALeDNA page |
26 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Sessilia, Balanidae, Megabalanus GBIFAnimalia, Arthropoda, Maxillopoda, Sessilia, Balanidae, Megabalanus GBIF ID: 3255395 NCBI |
12 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Sessilia, Chthamalidae, Chthamalus GBIFAnimalia, Arthropoda, Maxillopoda, Sessilia, Chthamalidae, Chthamalus GBIF ID: 2115612 NCBIEukaryota, Metazoa, Arthropoda, Maxillopoda, Sessilia, Chthamalidae, Chthamalus NCBI ID: 37898, CALeDNA page |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Sessilia, Tetraclitidae, Tetraclita GBIFAnimalia, Arthropoda, Maxillopoda, Sessilia, Tetraclitidae, Tetraclita GBIF ID: 2115805 NCBI |
100 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Pycnogonida, Pantopoda, Ammotheidae, Ammothea GBIFAnimalia, Arthropoda, Pycnogonida, Pantopoda, Ammotheidae, Ammothea GBIF ID: 2118547 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Pycnogonida, Pantopoda, Pycnogonidae, Pycnogonum GBIFAnimalia, Arthropoda, Pycnogonida, Pantopoda, Pycnogonidae, Pycnogonum GBIF ID: 2117211 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Animalia, Bryozoa, Gymnolaemata, Cheilostomata, Eurystomellidae, Integripelta GBIFAnimalia, Bryozoa, Gymnolaemata, Cheilostomatida, Eurystomellidae, Integripelta GBIF ID: 1009895 NCBI |
30 | ||
Normalized Taxa
Eukaryota, Animalia, Bryozoa, Gymnolaemata, Cheilostomata, Membraniporidae, Membranipora GBIFAnimalia, Bryozoa, Gymnolaemata, Cheilostomatida, Membraniporidae, Membranipora GBIF ID: 1006457 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Bryozoa, Gymnolaemata, Cheilostomata, Watersiporidae, Watersipora GBIFAnimalia, Bryozoa, Gymnolaemata, Cheilostomatida, Watersiporidae, Watersipora GBIF ID: 1005669 NCBI |
9 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Amphibia, Caudata, Ambystomatidae, Dicamptodon GBIFAnimalia, Chordata, Amphibia, Caudata, Ambystomatidae, Dicamptodon GBIF ID: 2432019 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Amphibia, Caudata, Plethodontidae, Batrachoseps GBIFAnimalia, Chordata, Amphibia, Caudata, Plethodontidae, Batrachoseps GBIF ID: 2431747 NCBI |
7 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Ascidiacea, Enterogona, Holozoidae, Distaplia GBIFAnimalia, Chordata, Ascidiacea, Aplousobranchia, Holozoidae, Distaplia GBIF ID: 2331247 NCBIEukaryota, Metazoa, Chordata, Ascidiacea, Enterogona, Clavelinidae, Distaplia NCBI ID: 322838, CALeDNA page |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Ascidiacea, Enterogona, Polyclinidae, Aplidium GBIFAnimalia, Chordata, Ascidiacea, Aplousobranchia, Polyclinidae, Aplidium GBIF ID: 2330825 NCBI |
10 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Ascidiacea, Enterogona, Polyclinidae, Synoicum GBIFAnimalia, Chordata, Ascidiacea, Aplousobranchia, Polyclinidae, Synoicum GBIF ID: 2331062 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Ascidiacea, Pleurogona, Pyuridae, Boltenia GBIFAnimalia, Chordata, Ascidiacea, Stolidobranchia, Pyuridae, Boltenia GBIF ID: 2331621 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Ascidiacea, Pleurogona, Styelidae, Botrylloides GBIFAnimalia, Chordata, Ascidiacea, Stolidobranchia, Styelidae, Botrylloides GBIF ID: 2332017 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Ascidiacea, Pleurogona, Styelidae, Botryllus GBIFAnimalia, Chordata, Ascidiacea, Stolidobranchia, Styelidae, Botryllus GBIF ID: 2332068 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Ascidiacea, Pleurogona, Styelidae, Cnemidocarpa GBIFAnimalia, Chordata, Ascidiacea, Stolidobranchia, Styelidae, Cnemidocarpa GBIF ID: 2332284 NCBIEukaryota, Metazoa, Chordata, Ascidiacea, Stolidobranchia, Styelidae, Cnemidocarpa NCBI ID: 30292, CALeDNA page |
6 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Ascidiacea, Pleurogona, Styelidae, Styela GBIFAnimalia, Chordata, Ascidiacea, Stolidobranchia, Styelidae, Styela GBIF ID: 2331924 NCBI |
16 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Elasmobranchii, Carcharhiniformes, Triakidae, Triakis GBIFAnimalia, Chordata, Elasmobranchii, Carcharhiniformes, Triakidae, Triakis GBIF ID: 2418368 NCBIEukaryota, Metazoa, Chordata, Chondrichthyes, Carcharhiniformes, Triakidae, Triakis NCBI ID: 7840, CALeDNA page |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Elasmobranchii, Myliobatiformes, Myliobatidae, Myliobatis GBIFAnimalia, Chordata, Elasmobranchii, Myliobatiformes, Myliobatidae, Myliobatis GBIF ID: 2419290 NCBIEukaryota, Metazoa, Chordata, Chondrichthyes, Myliobatiformes, Myliobatidae, Myliobatis NCBI ID: 55137, CALeDNA page |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Elasmobranchii, Rajiformes, Rajidae, Raja GBIFAnimalia, Chordata, Elasmobranchii, Rajiformes, Rajidae, Raja GBIF ID: 2342057 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Elasmobranchii, Rajiformes, Rhinobatidae, Platyrhinoidis GBIFAnimalia, Chordata, Elasmobranchii, Rhinopristiformes, Rhinobatidae, Platyrhinoidis GBIF ID: 2418957 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Holocephali, Chimaeriformes, Chimaeridae, Hydrolagus GBIFAnimalia, Chordata, Holocephali, Chimaeriformes, Chimaeridae, Hydrolagus GBIF ID: 2417351 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Carnivora, Canidae, Vulpes GBIFAnimalia, Chordata, Mammalia, Carnivora, Canidae, Vulpes GBIF ID: 5219234 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Carnivora, Mustelidae, Enhydra GBIFAnimalia, Chordata, Mammalia, Carnivora, Mustelidae, Enhydra GBIF ID: 2433669 NCBIEukaryota, Metazoa, Chordata, Mammalia, Carnivora, Mustelidae, Enhydra NCBI ID: 34881, CALeDNA page |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Carnivora, Mustelidae, Mustela GBIFAnimalia, Chordata, Mammalia, Carnivora, Mustelidae, Mustela GBIF ID: 2433922 NCBI |
2 |