To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
Pillar Point
GBIF Taxonomic Comparison
To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
GBIF unique family: 357
GBIF unique family with NCBI ID: 342
GBIF unique family with eDNA match: 127
Taxon | GBIF Occurences | NCBI Match | eDNA Match |
---|---|---|---|
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Isopoda, Idoteidae GBIFAnimalia, Arthropoda, Malacostraca, Isopoda, Idoteidae GBIF ID: 8888 NCBI |
11 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Isopoda, Ligiidae GBIFAnimalia, Arthropoda, Malacostraca, Isopoda, Ligiidae GBIF ID: 8890 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Lepadiformes, Lepadidae GBIFAnimalia, Arthropoda, Maxillopoda, Pedunculata, Lepadidae GBIF ID: 9693 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Scalpelliformes, Pollicipedidae GBIFAnimalia, Arthropoda, Maxillopoda, Pedunculata, Pollicipedidae GBIF ID: 5035 NCBIEukaryota, Metazoa, Arthropoda, Maxillopoda, Pedunculata, Pollicipedidae NCBI ID: 629293, CALeDNA page |
66 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Sessilia, Archaeobalanidae GBIFAnimalia, Arthropoda, Maxillopoda, Sessilia, Archaeobalanidae GBIF ID: 5103 NCBI |
13 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Sessilia, Balanidae GBIFAnimalia, Arthropoda, Maxillopoda, Sessilia, Balanidae GBIF ID: 9152 NCBIEukaryota, Metazoa, Arthropoda, Maxillopoda, Sessilia, Balanidae NCBI ID: 37806, CALeDNA page |
38 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Sessilia, Chthamalidae GBIFAnimalia, Arthropoda, Maxillopoda, Sessilia, Chthamalidae GBIF ID: 5104 NCBIEukaryota, Metazoa, Arthropoda, Maxillopoda, Sessilia, Chthamalidae NCBI ID: 37897, CALeDNA page |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Sessilia, Tetraclitidae GBIFAnimalia, Arthropoda, Maxillopoda, Sessilia, Tetraclitidae GBIF ID: 5112 NCBI |
100 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Pycnogonida, Pantopoda, Ammotheidae GBIFAnimalia, Arthropoda, Pycnogonida, Pantopoda, Ammotheidae GBIF ID: 6313 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Pycnogonida, Pantopoda, Pycnogonidae GBIFAnimalia, Arthropoda, Pycnogonida, Pantopoda, Pycnogonidae GBIF ID: 2014 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Animalia, Bryozoa, Gymnolaemata, Cheilostomata, Eurystomellidae GBIFAnimalia, Bryozoa, Gymnolaemata, Cheilostomatida, Eurystomellidae GBIF ID: 5808 NCBI |
30 | ||
Normalized Taxa
Eukaryota, Animalia, Bryozoa, Gymnolaemata, Cheilostomata, Membraniporidae GBIFAnimalia, Bryozoa, Gymnolaemata, Cheilostomatida, Membraniporidae GBIF ID: 2137 NCBIEukaryota, Metazoa, Bryozoa, Gymnolaemata, Cheilostomatida, Membraniporidae NCBI ID: 192924, CALeDNA page |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Bryozoa, Gymnolaemata, Cheilostomata, Watersiporidae GBIFAnimalia, Bryozoa, Gymnolaemata, Cheilostomatida, Watersiporidae GBIF ID: 3490 NCBI |
9 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Amphibia, Caudata, Ambystomatidae GBIFAnimalia, Chordata, Amphibia, Caudata, Ambystomatidae GBIF ID: 3101 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Amphibia, Caudata, Plethodontidae GBIFAnimalia, Chordata, Amphibia, Caudata, Plethodontidae GBIF ID: 6748 NCBI |
7 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Ascidiacea, Enterogona, Holozoidae GBIFAnimalia, Chordata, Ascidiacea, Aplousobranchia, Holozoidae GBIF ID: 9302 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Ascidiacea, Enterogona, Polyclinidae GBIFAnimalia, Chordata, Ascidiacea, Aplousobranchia, Polyclinidae GBIF ID: 7348 NCBI |
11 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Ascidiacea, Pleurogona, Pyuridae GBIFAnimalia, Chordata, Ascidiacea, Stolidobranchia, Pyuridae GBIF ID: 7345 NCBIEukaryota, Metazoa, Chordata, Ascidiacea, Stolidobranchia, Pyuridae NCBI ID: 7727, CALeDNA page |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Ascidiacea, Pleurogona, Styelidae GBIFAnimalia, Chordata, Ascidiacea, Stolidobranchia, Styelidae GBIF ID: 2331886 NCBIEukaryota, Metazoa, Chordata, Ascidiacea, Stolidobranchia, Styelidae NCBI ID: 7721, CALeDNA page |
28 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Elasmobranchii, Carcharhiniformes, Triakidae GBIFAnimalia, Chordata, Elasmobranchii, Carcharhiniformes, Triakidae GBIF ID: 2206 NCBIEukaryota, Metazoa, Chordata, Chondrichthyes, Carcharhiniformes, Triakidae NCBI ID: 7839, CALeDNA page |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Elasmobranchii, Myliobatiformes, Myliobatidae GBIFAnimalia, Chordata, Elasmobranchii, Myliobatiformes, Myliobatidae GBIF ID: 2193 NCBIEukaryota, Metazoa, Chordata, Chondrichthyes, Myliobatiformes, Myliobatidae NCBI ID: 1158979, CALeDNA page |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Elasmobranchii, Rajiformes, Rajidae GBIFAnimalia, Chordata, Elasmobranchii, Rajiformes, Rajidae GBIF ID: 5877 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Elasmobranchii, Rajiformes, Rhinobatidae GBIFAnimalia, Chordata, Elasmobranchii, Rhinopristiformes, Rhinobatidae GBIF ID: 5876 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Holocephali, Chimaeriformes, Chimaeridae GBIFAnimalia, Chordata, Holocephali, Chimaeriformes, Chimaeridae GBIF ID: 2181 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Carnivora, Canidae GBIFAnimalia, Chordata, Mammalia, Carnivora, Canidae GBIF ID: 9701 NCBIEukaryota, Metazoa, Chordata, Mammalia, Carnivora, Canidae NCBI ID: 9608, CALeDNA page |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Carnivora, Mustelidae GBIFAnimalia, Chordata, Mammalia, Carnivora, Mustelidae GBIF ID: 5307 NCBIEukaryota, Metazoa, Chordata, Mammalia, Carnivora, Mustelidae NCBI ID: 9655, CALeDNA page |
6 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Carnivora, Otariidae GBIFAnimalia, Chordata, Mammalia, Carnivora, Otariidae GBIF ID: 5309 NCBI |
41 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Carnivora, Phocidae GBIFAnimalia, Chordata, Mammalia, Carnivora, Phocidae GBIF ID: 5310 NCBIEukaryota, Metazoa, Chordata, Mammalia, Carnivora, Phocidae NCBI ID: 9709, CALeDNA page |
55 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Cetacea, Delphinidae GBIFAnimalia, Chordata, Mammalia, Cetacea, Delphinidae GBIF ID: 5314 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Cetacea, Eschrichtiidae GBIFAnimalia, Chordata, Mammalia, Cetacea, Eschrichtiidae GBIF ID: 5315 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Cetacea, Phocoenidae GBIFAnimalia, Chordata, Mammalia, Cetacea, Phocoenidae GBIF ID: 9361 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Lagomorpha, Leporidae GBIFAnimalia, Chordata, Mammalia, Lagomorpha, Leporidae GBIF ID: 9379 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Rodentia, Cricetidae GBIFAnimalia, Chordata, Mammalia, Rodentia, Cricetidae GBIF ID: 3240723 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Mammalia, Rodentia, Geomyidae GBIFAnimalia, Chordata, Mammalia, Rodentia, Geomyidae GBIF ID: 9437 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Accipitriformes, Accipitridae GBIFAnimalia, Chordata, Aves, Accipitriformes, Accipitridae GBIF ID: 2877 NCBIEukaryota, Metazoa, Chordata, Aves, Falconiformes, Accipitridae NCBI ID: 56259, CALeDNA page |
15 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Accipitriformes, Cathartidae GBIFAnimalia, Chordata, Aves, Accipitriformes, Cathartidae GBIF ID: 3242141 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Anseriformes, Anatidae GBIFAnimalia, Chordata, Aves, Anseriformes, Anatidae GBIF ID: 2986 NCBI |
140 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Apodiformes, Trochilidae GBIFAnimalia, Chordata, Aves, Apodiformes, Trochilidae GBIF ID: 5289 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Alcidae GBIFAnimalia, Chordata, Aves, Charadriiformes, Alcidae GBIF ID: 2985 NCBI |
39 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Charadriidae GBIFAnimalia, Chordata, Aves, Charadriiformes, Charadriidae GBIF ID: 2480210 NCBI |
33 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Haematopodidae GBIFAnimalia, Chordata, Aves, Charadriiformes, Haematopodidae GBIF ID: 4287243 NCBI |
45 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae GBIF ID: 9316 NCBI |
163 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae GBIF ID: 5282 NCBI |
199 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Stercorariidae GBIFAnimalia, Chordata, Aves, Charadriiformes, Stercorariidae GBIF ID: 9347 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Columbiformes, Columbidae GBIFAnimalia, Chordata, Aves, Columbiformes, Columbidae GBIF ID: 5233 NCBI |
12 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Coraciiformes, Alcedinidae GBIFAnimalia, Chordata, Aves, Coraciiformes, Alcedinidae GBIF ID: 2984 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Falconiformes, Falconidae GBIFAnimalia, Chordata, Aves, Falconiformes, Falconidae GBIF ID: 5240 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Gaviiformes, Gaviidae GBIFAnimalia, Chordata, Aves, Gaviiformes, Gaviidae GBIF ID: 9312 NCBIEukaryota, Metazoa, Chordata, Aves, Gaviiformes, Gaviidae NCBI ID: 30412, CALeDNA page |
56 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Gruiformes, Rallidae GBIFAnimalia, Chordata, Aves, Gruiformes, Rallidae GBIF ID: 9342 NCBI |
8 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Inguania, Phrynosomatidae GBIFAnimalia, Chordata, Reptilia, Squamata, Phrynosomatidae GBIF ID: 5016 NCBI |
5 |