To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
Pillar Point
GBIF Taxonomic Comparison
To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
GBIF unique species: 726
GBIF unique species with NCBI ID: 622
GBIF unique species with eDNA match: 48
Taxon | GBIF Occurences | NCBI Match | eDNA Match |
---|---|---|---|
Normalized Taxa
Eukaryota, Plantae, Chlorophyta, Ulvophyceae, Ulvales, Ulvaceae, Ulva, Ulva lactuca GBIFPlantae, Chlorophyta, Ulvophyceae, Ulvales, Ulvaceae, Ulva, Ulva lactuca GBIF ID: 5273309 NCBI |
11 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Compsopogonophyceae, Erythropeltidales, Erythrotrichiaceae, Smithora, Smithora naiadum GBIFPlantae, Rhodophyta, Compsopogonophyceae, Erythropeltidales, Erythrotrichiaceae, Smithora, Smithora naiadum GBIF ID: 2653831 NCBIEukaryota, --, --, Compsopogonophyceae, Erythropeltidales, Erythropeltidaceae, Smithora, Smithora naiadum NCBI ID: 82561, CALeDNA page |
15 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Ceramiales, Callithamniaceae, Callithamnion, Callithamnion pikeanum GBIFPlantae, Rhodophyta, Florideophyceae, Ceramiales, Callithamniaceae, Callithamnion, Callithamnion pikeanum GBIF ID: 2658611 NCBIEukaryota, --, --, Florideophyceae, Ceramiales, Ceramiaceae, Callithamnion, Callithamnion pikeanum NCBI ID: 189623, CALeDNA page |
6 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Ceramiales, Ceramiaceae, Microcladia, Microcladia borealis GBIFPlantae, Rhodophyta, Florideophyceae, Ceramiales, Ceramiaceae, Microcladia, Microcladia borealis GBIF ID: 5276727 NCBI |
9 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Ceramiales, Ceramiaceae, Microcladia, Microcladia coulteri GBIFPlantae, Rhodophyta, Florideophyceae, Ceramiales, Ceramiaceae, Microcladia, Microcladia coulteri GBIF ID: 5276729 NCBI |
12 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Ceramiales, Delesseriaceae, Cryptopleura, Cryptopleura lobulifera GBIFPlantae, Rhodophyta, Florideophyceae, Ceramiales, Delesseriaceae, Cryptopleura, Cryptopleura lobulifera GBIF ID: 5278337 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Ceramiales, Delesseriaceae, Cryptopleura, Cryptopleura ruprechtiana GBIFPlantae, Rhodophyta, Florideophyceae, Ceramiales, Delesseriaceae, Cryptopleura, Cryptopleura ruprechtiana GBIF ID: 5278325 NCBIEukaryota, --, --, Florideophyceae, Ceramiales, Delesseriaceae, Cryptopleura, Cryptopleura ruprechtiana NCBI ID: 131095, CALeDNA page |
8 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Ceramiales, Delesseriaceae, Cryptopleura, Cryptopleura violacea GBIFPlantae, Rhodophyta, Florideophyceae, Ceramiales, Delesseriaceae, Cryptopleura, Cryptopleura violacea GBIF ID: 5278347 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Ceramiales, Delesseriaceae, Hymenena, Hymenena flabelligera GBIFPlantae, Rhodophyta, Florideophyceae, Ceramiales, Delesseriaceae, Hymenena, Hymenena flabelligera GBIF ID: 2661409 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Ceramiales, Rhodomelaceae, Laurencia, Laurencia spectabilis GBIFPlantae, Rhodophyta, Florideophyceae, Ceramiales, Rhodomelaceae, Laurencia, Laurencia spectabilis GBIF ID: 2659419 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Ceramiales, Rhodomelaceae, Neorhodomela, Neorhodomela larix GBIFPlantae, Rhodophyta, Florideophyceae, Ceramiales, Rhodomelaceae, Neorhodomela, Neorhodomela larix GBIF ID: 2659770 NCBIEukaryota, --, --, Florideophyceae, Ceramiales, Rhodomelaceae, Neorhodomela, Neorhodomela larix NCBI ID: 159598, CALeDNA page |
25 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Ceramiales, Rhodomelaceae, Polysiphonia, Polysiphonia californica GBIFPlantae, Rhodophyta, Florideophyceae, Ceramiales, Rhodomelaceae, Polysiphonia, Polysiphonia californica GBIF ID: 5277839 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Ceramiales, Wrangeliaceae, Neoptilota, Neoptilota densa GBIFPlantae, Rhodophyta, Florideophyceae, Ceramiales, Wrangeliaceae, Neoptilota, Neoptilota densa GBIF ID: 2658322 NCBI |
13 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Corallinales, Corallinaceae, Corallina, Corallina vancouveriensis GBIFPlantae, Rhodophyta, Florideophyceae, Corallinales, Corallinaceae, Corallina, Corallina vancouveriensis GBIF ID: 5710457 NCBIEukaryota, --, --, Florideophyceae, Corallinales, Corallinaceae, Corallina, Corallina vancouveriensis NCBI ID: 1086050, CALeDNA page |
3 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Corallinales, Hapalidiaceae, Melobesia, Melobesia mediocris GBIFPlantae, Rhodophyta, Florideophyceae, Corallinales, Hapalidiaceae, Melobesia, Melobesia mediocris GBIF ID: 2654454 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Gigartinales, Dumontiaceae, Pikea, Pikea californica GBIFPlantae, Rhodophyta, Florideophyceae, Gigartinales, Dumontiaceae, Pikea, Pikea californica GBIF ID: 5279303 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Gigartinales, Endocladiaceae, Endocladia, Endocladia muricata GBIFPlantae, Rhodophyta, Florideophyceae, Gigartinales, Endocladiaceae, Endocladia, Endocladia muricata GBIF ID: 2667610 NCBIEukaryota, --, --, Florideophyceae, Gigartinales, Endocladiaceae, Endocladia, Endocladia muricata NCBI ID: 31421, CALeDNA page |
14 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Gigartinales, Gigartinaceae, Chondracanthus, Chondracanthus corymbiferus GBIFPlantae, --, --, --, --, --, Chondracanthus corymbiferus GBIF ID: 5279167 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Gigartinales, Gigartinaceae, Gigartina, Gigartina canaliculata GBIFPlantae, Rhodophyta, Florideophyceae, Gigartinales, Gigartinaceae, Gigartina, Gigartina canaliculata GBIF ID: 2666078 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Gigartinales, Gigartinaceae, Gigartina, Gigartina papillata GBIFPlantae, Rhodophyta, Florideophyceae, Gigartinales, Gigartinaceae, Gigartina, Gigartina papillata GBIF ID: 2667322 NCBIEukaryota, --, --, Florideophyceae, Gigartinales, Phyllophoraceae, Mastocarpus, Mastocarpus papillatus NCBI ID: 31436, CALeDNA page |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Gigartinales, Gigartinaceae, Iridaea, Iridaea cordata GBIFPlantae, Rhodophyta, Florideophyceae, Gigartinales, Gigartinaceae, Iridaea, Iridaea cordata GBIF ID: 2666291 NCBI |
14 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Gigartinales, Gigartinaceae, Iridaea, Iridaea flaccida GBIFPlantae, Rhodophyta, Florideophyceae, Gigartinales, Gigartinaceae, Iridaea, Iridaea flaccida GBIF ID: 2666266 NCBI |
15 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Gigartinales, Gigartinaceae, Iridaea, Iridaea splendens GBIFPlantae, Rhodophyta, Florideophyceae, Gigartinales, Gigartinaceae, Iridaea, Iridaea splendens GBIF ID: 2666297 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Gigartinales, Kallymeniaceae, Erythrophyllum, Erythrophyllum delesserioides GBIFPlantae, Rhodophyta, Florideophyceae, Gigartinales, Kallymeniaceae, Erythrophyllum, Erythrophyllum delesserioides GBIF ID: 5279261 NCBIEukaryota, --, --, Florideophyceae, Gigartinales, Kallymeniaceae, Erythrophyllum, Erythrophyllum delesserioides NCBI ID: 128537, CALeDNA page |
17 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Gigartinales, Solieriaceae, Sarcodiotheca, Sarcodiotheca gaudichaudii GBIFPlantae, Rhodophyta, Florideophyceae, Gigartinales, Solieriaceae, Sarcodiotheca, Sarcodiotheca gaudichaudii GBIF ID: 2668224 NCBI |
8 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Gracilariales, Gracilariaceae, Gracilaria, Gracilaria andersonii GBIFPlantae, Rhodophyta, Florideophyceae, Gracilariales, Gracilariaceae, Gracilaria, Gracilaria andersonii GBIF ID: 2665604 NCBIEukaryota, --, --, Florideophyceae, Gracilariales, Gracilariaceae, Gracilariopsis, Gracilariopsis andersonii NCBI ID: 408198, CALeDNA page |
2 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Gracilariales, Gracilariaceae, Gracilaria, Gracilaria pacifica GBIFPlantae, Rhodophyta, Florideophyceae, Gracilariales, Gracilariaceae, Gracilaria, Gracilaria pacifica GBIF ID: 5279007 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Halymeniales, Halymeniaceae, Grateloupia, Prionitis lanceolata GBIFPlantae, Rhodophyta, Florideophyceae, Halymeniales, Halymeniaceae, Grateloupia, Prionitis lanceolata GBIF ID: 5276648 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Nemaliales, Liagoraceae, Cumagloia, Cumagloia andersonii GBIFPlantae, Rhodophyta, Florideophyceae, Nemaliales, Liagoraceae, Cumagloia, Cumagloia andersonii GBIF ID: 2664966 NCBI |
7 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Palmariales, Palmariaceae, Halosaccion, Halosaccion glandiforme GBIFPlantae, Rhodophyta, Florideophyceae, Palmariales, Palmariaceae, Halosaccion, Halosaccion glandiforme GBIF ID: 2668575 NCBI |
66 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Plocamiales, Plocamiaceae, Plocamium, Plocamium cartilagineum GBIFPlantae, Rhodophyta, Florideophyceae, Plocamiales, Plocamiaceae, Plocamium, Plocamium cartilagineum GBIF ID: 5278595 Plantae, Rhodophyta, Florideophyceae, Plocamiales, Plocamiaceae, Plocamium, Plocamium cartilagineum GBIF ID: 5278606 Plantae, Rhodophyta, Florideophyceae, Plocamiales, Plocamiaceae, Plocamium, Plocamium cartilagineum GBIF ID: 9033079 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Plocamiales, Plocamiaceae, Plocamium, Plocamium oregonum GBIFPlantae, Rhodophyta, Florideophyceae, Plocamiales, Plocamiaceae, Plocamium, Plocamium oregonum GBIF ID: 5278587 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Plocamiales, Plocamiaceae, Plocamium, Plocamium pacificum GBIFPlantae, Rhodophyta, Florideophyceae, Plocamiales, Plocamiaceae, Plocamium, Plocamium pacificum GBIF ID: 5278604 NCBIEukaryota, --, --, Florideophyceae, Plocamiales, Plocamiaceae, Plocamium, Plocamium pacificum NCBI ID: 321259, CALeDNA page |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Rhodymeniales, Champiaceae, Gastroclonium, Gastroclonium coulteri GBIFPlantae, Rhodophyta, Florideophyceae, Rhodymeniales, Champiaceae, Gastroclonium, Gastroclonium coulteri GBIF ID: 2663798 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Alismatales, Araceae, Zantedeschia, Zantedeschia aethiopica GBIFPlantae, Tracheophyta, Liliopsida, Alismatales, Araceae, Zantedeschia, Zantedeschia aethiopica GBIF ID: 2868827 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Alismatales, Zosteraceae, Phyllospadix, Phyllospadix scouleri GBIFPlantae, Tracheophyta, Liliopsida, Alismatales, Zosteraceae, Phyllospadix, Phyllospadix scouleri GBIF ID: 2863958 NCBI |
24 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Alismatales, Zosteraceae, Phyllospadix, Phyllospadix torreyi GBIFPlantae, Tracheophyta, Liliopsida, Alismatales, Zosteraceae, Phyllospadix, Phyllospadix torreyi GBIF ID: 2863954 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Alismatales, Zosteraceae, Zostera, Zostera marina GBIFPlantae, Tracheophyta, Liliopsida, Alismatales, Zosteraceae, Zostera, Zostera marina GBIF ID: 2863967 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Apiales, Apiaceae, Angelica, Angelica hendersonii GBIFPlantae, Tracheophyta, Magnoliopsida, Apiales, Apiaceae, Angelica, Angelica hendersonii GBIF ID: 8155732 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Apiales, Apiaceae, Conium, Conium maculatum GBIFPlantae, Tracheophyta, Magnoliopsida, Apiales, Apiaceae, Conium, Conium maculatum GBIF ID: 3034807 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Apiales, Apiaceae, Foeniculum, Foeniculum vulgare GBIFPlantae, Tracheophyta, Magnoliopsida, Apiales, Apiaceae, Foeniculum, Foeniculum vulgare GBIF ID: 3034922 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Apiales, Apiaceae, Heracleum, Heracleum sphondylium GBIFPlantae, Tracheophyta, Magnoliopsida, Apiales, Apiaceae, Heracleum, Heracleum sphondylium GBIF ID: 3034826 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Apiales, Apiaceae, Sanicula, Sanicula crassicaulis GBIFPlantae, Tracheophyta, Magnoliopsida, Apiales, Apiaceae, Sanicula, Sanicula crassicaulis GBIF ID: 3034844 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asparagales, Asparagaceae, Chlorogalum, Chlorogalum pomeridianum GBIFPlantae, Tracheophyta, Liliopsida, Asparagales, Asparagaceae, Chlorogalum, Chlorogalum pomeridianum GBIF ID: 2772636 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Achillea, Achillea millefolium GBIFPlantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Achillea, Achillea millefolium GBIF ID: 9221087 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Ambrosia, Ambrosia chamissonis GBIFPlantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Ambrosia, Ambrosia chamissonis GBIF ID: 3110718 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Anaphalis, Anaphalis margaritacea GBIFPlantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Anaphalis, Anaphalis margaritacea GBIF ID: 4926336 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Artemisia, Artemisia californica GBIFPlantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Artemisia, Artemisia californica GBIF ID: 3120755 NCBI |
7 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Artemisia, Artemisia pycnocephala GBIFPlantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Artemisia, Artemisia pycnocephala GBIF ID: 3120667 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Baccharis, Baccharis pilularis GBIFPlantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Baccharis, Baccharis pilularis GBIF ID: 3129497 NCBI |
13 |