To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
Pillar Point
GBIF Taxonomic Comparison
To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
GBIF unique genus: 563
GBIF unique genus with NCBI ID: 538
GBIF unique genus with eDNA match: 93
Taxon | GBIF Occurences | NCBI Match | eDNA Match |
---|---|---|---|
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Cirsium GBIFPlantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Cirsium GBIF ID: 3112554 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Cotula GBIFPlantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Cotula GBIF ID: 3112068 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Deinandra GBIFPlantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Deinandra GBIF ID: 3106606 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Erigeron GBIFPlantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Erigeron GBIF ID: 3146588 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Eriophyllum GBIFPlantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Eriophyllum GBIF ID: 3130444 NCBI |
11 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Euthamia GBIFPlantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Euthamia GBIF ID: 3092773 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Glebionis GBIFPlantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Glebionis GBIF ID: 3141100 NCBI |
7 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Grindelia GBIFPlantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Grindelia GBIF ID: 3146171 NCBI |
7 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Helminthotheca GBIFPlantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Helminthotheca GBIF ID: 7922421 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Leucanthemum GBIFPlantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Leucanthemum GBIF ID: 5400948 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Madia GBIFPlantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Madia GBIF ID: 3140905 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Silybum GBIFPlantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Silybum GBIF ID: 3145213 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Stephanomeria GBIFPlantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Stephanomeria GBIF ID: 3141064 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Symphyotrichum GBIFPlantae, Tracheophyta, Magnoliopsida, Asterales, Asteraceae, Symphyotrichum GBIF ID: 3151391 NCBI |
12 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Boraginales, Boraginaceae, Echium GBIFPlantae, Tracheophyta, Magnoliopsida, Boraginales, Boraginaceae, Echium GBIF ID: 2925888 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Boraginales, Heliotropiaceae, Heliotropium GBIFPlantae, Tracheophyta, Magnoliopsida, Boraginales, Heliotropiaceae, Heliotropium GBIF ID: 2925766 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Brassicales, Brassicaceae, Cakile GBIFPlantae, Tracheophyta, Magnoliopsida, Brassicales, Brassicaceae, Cakile GBIF ID: 3048827 NCBI |
9 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Brassicales, Brassicaceae, Lobularia GBIFPlantae, Tracheophyta, Magnoliopsida, Brassicales, Brassicaceae, Lobularia GBIF ID: 3040809 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Brassicales, Brassicaceae, Raphanus GBIFPlantae, Tracheophyta, Magnoliopsida, Brassicales, Brassicaceae, Raphanus GBIF ID: 3040962 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Brassicales, Brassicaceae, Sinapis GBIFPlantae, Tracheophyta, Magnoliopsida, Brassicales, Brassicaceae, Sinapis GBIF ID: 3047584 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Brassicales, Tropaeolaceae, Tropaeolum GBIFPlantae, Tracheophyta, Magnoliopsida, Brassicales, Tropaeolaceae, Tropaeolum GBIF ID: 2889929 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Caryophyllales, Aizoaceae, Carpobrotus GBIFPlantae, Tracheophyta, Magnoliopsida, Caryophyllales, Aizoaceae, Carpobrotus GBIF ID: 3084841 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Caryophyllales, Aizoaceae, Tetragonia GBIFPlantae, Tracheophyta, Magnoliopsida, Caryophyllales, Aizoaceae, Tetragonia GBIF ID: 3084862 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Caryophyllales, Amaranthaceae, Atriplex GBIFPlantae, Tracheophyta, Magnoliopsida, Caryophyllales, Amaranthaceae, Atriplex GBIF ID: 3083650 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Caryophyllales, Amaranthaceae, Chenopodiastrum GBIFPlantae, Tracheophyta, Magnoliopsida, Caryophyllales, Amaranthaceae, Chenopodiastrum GBIF ID: 7578202 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Caryophyllales, Amaranthaceae, Etriplex GBIFPlantae, Tracheophyta, Magnoliopsida, Caryophyllales, Amaranthaceae, Etriplex GBIF ID: 9387545 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Caryophyllales, Nyctaginaceae, Abronia GBIFPlantae, Tracheophyta, Magnoliopsida, Caryophyllales, Nyctaginaceae, Abronia GBIF ID: 3086103 NCBI |
15 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Caryophyllales, Polygonaceae, Eriogonum GBIFPlantae, Tracheophyta, Magnoliopsida, Caryophyllales, Polygonaceae, Eriogonum GBIF ID: 8381158 NCBI |
8 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Caryophyllales, Polygonaceae, Rumex GBIFPlantae, Tracheophyta, Magnoliopsida, Caryophyllales, Polygonaceae, Rumex GBIF ID: 2888942 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Cucurbitales, Cucurbitaceae, Marah GBIFPlantae, Tracheophyta, Magnoliopsida, Cucurbitales, Cucurbitaceae, Marah GBIF ID: 2874539 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Dipsacales, Caprifoliaceae, Sixalix GBIFPlantae, Tracheophyta, Magnoliopsida, Dipsacales, Caprifoliaceae, Sixalix GBIF ID: 7301005 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Ericales, Primulaceae, Lysimachia GBIFPlantae, Tracheophyta, Magnoliopsida, Ericales, Primulaceae, Lysimachia GBIF ID: 3169330 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Fabales, Fabaceae, Astragalus GBIFPlantae, Tracheophyta, Magnoliopsida, Fabales, Fabaceae, Astragalus GBIF ID: 2933951 NCBI |
10 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Fabales, Fabaceae, Lupinus GBIFPlantae, Tracheophyta, Magnoliopsida, Fabales, Fabaceae, Lupinus GBIF ID: 2963774 NCBI |
9 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Fabales, Fabaceae, Medicago GBIFPlantae, Tracheophyta, Magnoliopsida, Fabales, Fabaceae, Medicago GBIF ID: 2965200 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Fabales, Fabaceae, Vicia GBIFPlantae, Tracheophyta, Magnoliopsida, Fabales, Fabaceae, Vicia GBIF ID: 2974751 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Geraniales, Geraniaceae, Geranium GBIFPlantae, Tracheophyta, Magnoliopsida, Geraniales, Geraniaceae, Geranium GBIF ID: 2889949 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Lamiales, Orobanchaceae, Aphyllon GBIFPlantae, Tracheophyta, Magnoliopsida, Lamiales, Orobanchaceae, Aphyllon GBIF ID: 7332985 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Lamiales, Orobanchaceae, Bellardia GBIFPlantae, Tracheophyta, Magnoliopsida, Lamiales, Orobanchaceae, Bellardia GBIF ID: 3171811 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Lamiales, Orobanchaceae, Castilleja GBIFPlantae, Tracheophyta, Magnoliopsida, Lamiales, Orobanchaceae, Castilleja GBIF ID: 3170565 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Lamiales, Phrymaceae, Diplacus GBIFPlantae, Tracheophyta, Magnoliopsida, Lamiales, Phrymaceae, Diplacus GBIF ID: 3170825 NCBI |
10 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Lamiales, Plantaginaceae, Plantago GBIFPlantae, Tracheophyta, Magnoliopsida, Lamiales, Plantaginaceae, Plantago GBIF ID: 3189695 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Lamiales, Scrophulariaceae, Myoporum GBIFPlantae, Tracheophyta, Magnoliopsida, Lamiales, Scrophulariaceae, Myoporum GBIF ID: 3172650 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Lamiales, Scrophulariaceae, Scrophularia GBIFPlantae, Tracheophyta, Magnoliopsida, Lamiales, Scrophulariaceae, Scrophularia GBIF ID: 3170861 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Malvales, Malvaceae, Sidalcea GBIFPlantae, Tracheophyta, Magnoliopsida, Malvales, Malvaceae, Sidalcea GBIF ID: 3152711 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Myrtales, Lythraceae, Lythrum GBIFPlantae, Tracheophyta, Magnoliopsida, Myrtales, Lythraceae, Lythrum GBIF ID: 3188731 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Myrtales, Onagraceae, Camissonia GBIFPlantae, Tracheophyta, Magnoliopsida, Myrtales, Onagraceae, Camissonia GBIF ID: 3188931 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Oxalidales, Oxalidaceae, Oxalis GBIFPlantae, Tracheophyta, Magnoliopsida, Oxalidales, Oxalidaceae, Oxalis GBIF ID: 2891642 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Poales, Poaceae, Avena GBIFPlantae, Tracheophyta, Liliopsida, Poales, Poaceae, Avena GBIF ID: 2705282 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Poales, Poaceae, Cortaderia GBIFPlantae, Tracheophyta, Liliopsida, Poales, Poaceae, Cortaderia GBIF ID: 2704519 NCBI |
3 |