To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
Pillar Point
GBIF Taxonomic Comparison
To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
GBIF unique species: 726
GBIF unique species with NCBI ID: 622
GBIF unique species with eDNA match: 48
Taxon | GBIF Occurences | NCBI Match | eDNA Match |
---|---|---|---|
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Gaviiformes, Gaviidae, Gavia, Gavia immer GBIFAnimalia, Chordata, Aves, Gaviiformes, Gaviidae, Gavia, Gavia immer GBIF ID: 2481962 NCBI |
41 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Gaviiformes, Gaviidae, Gavia, Gavia pacifica GBIFAnimalia, Chordata, Aves, Gaviiformes, Gaviidae, Gavia, Gavia pacifica GBIF ID: 2481955 NCBIEukaryota, Metazoa, Chordata, Aves, Gaviiformes, Gaviidae, Gavia, Gavia pacifica NCBI ID: 85097, CALeDNA page |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Gaviiformes, Gaviidae, Gavia, Gavia stellata GBIFAnimalia, Chordata, Aves, Gaviiformes, Gaviidae, Gavia, Gavia stellata GBIF ID: 2481958 NCBI |
13 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Gruiformes, Rallidae, Fulica, Fulica americana GBIFAnimalia, Chordata, Aves, Gruiformes, Rallidae, Fulica, Fulica americana GBIF ID: 2474393 NCBI |
8 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Inguania, Phrynosomatidae, Sceloporus, Sceloporus occidentalis GBIFAnimalia, Chordata, Reptilia, Squamata, Phrynosomatidae, Sceloporus, Sceloporus occidentalis GBIF ID: 2451234 Animalia, Chordata, Reptilia, Squamata, Phrynosomatidae, Sceloporus, Sceloporus occidentalis GBIF ID: 6159810 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Corvidae, Aphelocoma, Aphelocoma californica GBIFAnimalia, Chordata, Aves, Passeriformes, Corvidae, Aphelocoma, Aphelocoma californica GBIF ID: 2482414 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Corvidae, Corvus, Corvus corax GBIFAnimalia, Chordata, Aves, Passeriformes, Corvidae, Corvus, Corvus corax GBIF ID: 2482492 NCBI |
13 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Emberizidae, Melospiza, Melospiza melodia GBIFAnimalia, Chordata, Aves, Passeriformes, Emberizidae, Melospiza, Melospiza melodia GBIF ID: 2492196 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Emberizidae, Melozone, Melozone crissalis GBIFAnimalia, Chordata, Aves, Passeriformes, Emberizidae, Melozone, Melozone crissalis GBIF ID: 7341600 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Emberizidae, Molothrus, Molothrus ater GBIFAnimalia, Chordata, Aves, Passeriformes, Emberizidae, Molothrus, Molothrus ater GBIF ID: 2484391 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Emberizidae, Passerculus, Passerculus sandwichensis GBIFAnimalia, Chordata, Aves, Passeriformes, Emberizidae, Passerculus, Passerculus sandwichensis GBIF ID: 5231142 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Emberizidae, Pipilo, Pipilo maculatus GBIFAnimalia, Chordata, Aves, Passeriformes, Emberizidae, Pipilo, Pipilo maculatus GBIF ID: 9709230 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Emberizidae, Zonotrichia, Zonotrichia albicollis GBIFAnimalia, Chordata, Aves, Passeriformes, Emberizidae, Zonotrichia, Zonotrichia albicollis GBIF ID: 5231140 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Emberizidae, Zonotrichia, Zonotrichia leucophrys GBIFAnimalia, Chordata, Aves, Passeriformes, Emberizidae, Zonotrichia, Zonotrichia leucophrys GBIF ID: 5231132 Animalia, Chordata, Aves, Passeriformes, Emberizidae, Zonotrichia, Zonotrichia leucophrys GBIF ID: 6173256 NCBI |
21 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Fringillidae, Haemorhous, Haemorhous mexicanus GBIFAnimalia, Chordata, Aves, Passeriformes, Fringillidae, Haemorhous, Haemorhous mexicanus GBIF ID: 8323485 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Fringillidae, Haemorhous, Haemorhous purpureus GBIFAnimalia, Chordata, Aves, Passeriformes, Fringillidae, Haemorhous, Haemorhous purpureus GBIF ID: 7804446 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Fringillidae, Spinus, Spinus psaltria GBIFAnimalia, Chordata, Aves, Passeriformes, Fringillidae, Spinus, Spinus psaltria GBIF ID: 5231647 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Hirundinidae, Hirundo, Hirundo rustica GBIFAnimalia, Chordata, Aves, Passeriformes, Hirundinidae, Hirundo, Hirundo rustica GBIF ID: 9515886 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Icteridae, Euphagus, Euphagus cyanocephalus GBIFAnimalia, Chordata, Aves, Passeriformes, Icteridae, Euphagus, Euphagus cyanocephalus GBIF ID: 2484183 NCBI |
12 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Mimidae, Mimus, Mimus polyglottos GBIFAnimalia, Chordata, Aves, Passeriformes, Mimidae, Mimus, Mimus polyglottos GBIF ID: 5231677 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Muscicapidae, Turdus, Turdus migratorius GBIFAnimalia, Chordata, Aves, Passeriformes, Muscicapidae, Turdus, Turdus migratorius GBIF ID: 9510564 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Paridae, Poecile, Poecile rufescens GBIFAnimalia, Chordata, Aves, Passeriformes, Paridae, Poecile, Poecile rufescens GBIF ID: 2487783 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Parulidae, Cardellina, Cardellina pusilla GBIFAnimalia, Chordata, Aves, Passeriformes, Parulidae, Cardellina, Cardellina pusilla GBIF ID: 7341606 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Parulidae, Geothlypis, Geothlypis trichas GBIFAnimalia, Chordata, Aves, Passeriformes, Parulidae, Geothlypis, Geothlypis trichas GBIF ID: 2489670 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Parulidae, Setophaga, Setophaga auduboni GBIFAnimalia, Chordata, Aves, Passeriformes, Parulidae, Setophaga, Setophaga auduboni GBIF ID: 6542061 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Parulidae, Setophaga, Setophaga coronata GBIFAnimalia, Chordata, Aves, Passeriformes, Parulidae, Setophaga, Setophaga coronata GBIF ID: 7341805 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Passeridae, Passer, Passer domesticus GBIFAnimalia, Chordata, Aves, Passeriformes, Passeridae, Passer, Passer domesticus GBIF ID: 5231190 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Regulidae, Regulus, Regulus satrapa GBIFAnimalia, Chordata, Aves, Passeriformes, Regulidae, Regulus, Regulus satrapa GBIF ID: 2484591 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Sittidae, Sitta, Sitta pygmaea GBIFAnimalia, Chordata, Aves, Passeriformes, Sittidae, Sitta, Sitta pygmaea GBIF ID: 2484907 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Sturnidae, Sturnus, Sturnus vulgaris GBIFAnimalia, Chordata, Aves, Passeriformes, Sturnidae, Sturnus, Sturnus vulgaris GBIF ID: 9809229 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Sturnidae, Toxostoma, Toxostoma redivivum GBIFAnimalia, Chordata, Aves, Passeriformes, Sturnidae, Toxostoma, Toxostoma redivivum GBIF ID: 5231713 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Troglodytidae, Thryomanes, Thryomanes bewickii GBIFAnimalia, Chordata, Aves, Passeriformes, Troglodytidae, Thryomanes, Thryomanes bewickii GBIF ID: 2493843 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Tyrannidae, Contopus, Contopus cooperi GBIFAnimalia, Chordata, Aves, Passeriformes, Tyrannidae, Contopus, Contopus cooperi GBIF ID: 5229743 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Tyrannidae, Empidonax, Empidonax traillii GBIFAnimalia, Chordata, Aves, Passeriformes, Tyrannidae, Empidonax, Empidonax traillii GBIF ID: 2482786 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Tyrannidae, Sayornis, Sayornis nigricans GBIFAnimalia, Chordata, Aves, Passeriformes, Tyrannidae, Sayornis, Sayornis nigricans GBIF ID: 2483612 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Tyrannidae, Sayornis, Sayornis saya GBIFAnimalia, Chordata, Aves, Passeriformes, Tyrannidae, Sayornis, Sayornis saya GBIF ID: 2483607 NCBI |
7 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Tyrannidae, Tyrannus, Tyrannus forficatus GBIFAnimalia, Chordata, Aves, Passeriformes, Tyrannidae, Tyrannus, Tyrannus forficatus GBIF ID: 5229687 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Tyrannidae, Tyrannus, Tyrannus melancholicus GBIFAnimalia, Chordata, Aves, Passeriformes, Tyrannidae, Tyrannus, Tyrannus melancholicus GBIF ID: 5229662 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Passeriformes, Tyrannidae, Tyrannus, Tyrannus verticalis GBIFAnimalia, Chordata, Aves, Passeriformes, Tyrannidae, Tyrannus, Tyrannus verticalis GBIF ID: 5229675 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Pelecaniformes, Ardeidae, Ardea, Ardea alba GBIFAnimalia, Chordata, Aves, Pelecaniformes, Ardeidae, Ardea, Ardea alba GBIF ID: 9752617 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Pelecaniformes, Ardeidae, Ardea, Ardea herodias GBIFAnimalia, Chordata, Aves, Pelecaniformes, Ardeidae, Ardea, Ardea herodias GBIF ID: 9630752 NCBI |
54 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Pelecaniformes, Ardeidae, Bubulcus, Bubulcus ibis GBIFAnimalia, Chordata, Aves, Pelecaniformes, Ardeidae, Bubulcus, Bubulcus ibis GBIF ID: 2480830 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Pelecaniformes, Ardeidae, Egretta, Egretta thula GBIFAnimalia, Chordata, Aves, Pelecaniformes, Ardeidae, Egretta, Egretta thula GBIF ID: 2480873 NCBI |
42 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Pelecaniformes, Ardeidae, Nycticorax, Nycticorax nycticorax GBIFAnimalia, Chordata, Aves, Pelecaniformes, Ardeidae, Nycticorax, Nycticorax nycticorax GBIF ID: 2480863 NCBI |
32 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Pelecaniformes, Pelecanidae, Pelecanus, Pelecanus occidentalis GBIFAnimalia, Chordata, Aves, Pelecaniformes, Pelecanidae, Pelecanus, Pelecanus occidentalis GBIF ID: 5229158 Animalia, Chordata, Aves, Pelecaniformes, Pelecanidae, Pelecanus, Pelecanus occidentalis GBIF ID: 5229161 NCBI |
56 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Piciformes, Picidae, Colaptes, Colaptes auratus GBIFAnimalia, Chordata, Aves, Piciformes, Picidae, Colaptes, Colaptes auratus GBIF ID: 2478259 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Podicipediformes, Podicipedidae, Aechmophorus, Aechmophorus clarkii GBIFAnimalia, Chordata, Aves, Podicipediformes, Podicipedidae, Aechmophorus, Aechmophorus clarkii GBIF ID: 2482032 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Podicipediformes, Podicipedidae, Aechmophorus, Aechmophorus occidentalis GBIFAnimalia, Chordata, Aves, Podicipediformes, Podicipedidae, Aechmophorus, Aechmophorus occidentalis GBIF ID: 2482033 Animalia, Chordata, Aves, Podicipediformes, Podicipedidae, Aechmophorus, Aechmophorus occidentalis GBIF ID: 7191589 NCBI |
29 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Podicipediformes, Podicipedidae, Podiceps, Podiceps auritus GBIFAnimalia, Chordata, Aves, Podicipediformes, Podicipedidae, Podiceps, Podiceps auritus GBIF ID: 2482059 NCBI |
7 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Podicipediformes, Podicipedidae, Podiceps, Podiceps nigricollis GBIFAnimalia, Chordata, Aves, Podicipediformes, Podicipedidae, Podiceps, Podiceps nigricollis GBIF ID: 2482065 NCBI |
18 |