To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
Pillar Point
GBIF Taxonomic Comparison
To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
GBIF unique species: 726
GBIF unique species with NCBI ID: 622
GBIF unique species with eDNA match: 48
Taxon | GBIF Occurences | NCBI Match | eDNA Match |
---|---|---|---|
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Alcidae, Synthliboramphus, Synthliboramphus scrippsi GBIFAnimalia, Chordata, Aves, Charadriiformes, Alcidae, Synthliboramphus, Synthliboramphus scrippsi GBIF ID: 8363918 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Alcidae, Uria, Uria aalge GBIFAnimalia, Chordata, Aves, Charadriiformes, Alcidae, Uria, Uria aalge GBIF ID: 2481342 NCBI |
19 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Charadriidae, Charadrius, Charadrius semipalmatus GBIFAnimalia, Chordata, Aves, Charadriiformes, Charadriidae, Charadrius, Charadrius semipalmatus GBIF ID: 2480295 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Charadriidae, Charadrius, Charadrius vociferus GBIFAnimalia, Chordata, Aves, Charadriiformes, Charadriidae, Charadrius, Charadrius vociferus GBIF ID: 2480320 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Charadriidae, Pluvialis, Pluvialis squatarola GBIFAnimalia, Chordata, Aves, Charadriiformes, Charadriidae, Pluvialis, Pluvialis squatarola GBIF ID: 2480327 NCBI |
27 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Haematopodidae, Haematopus, Haematopus ater GBIFAnimalia, Chordata, Aves, Charadriiformes, Haematopodidae, Haematopus, Haematopus ater GBIF ID: 2480262 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Haematopodidae, Haematopus, Haematopus bachmani GBIFAnimalia, Chordata, Aves, Charadriiformes, Haematopodidae, Haematopus, Haematopus bachmani GBIF ID: 2480272 NCBI |
44 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Chroicocephalus, Chroicocephalus philadelphia GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Chroicocephalus, Chroicocephalus philadelphia GBIF ID: 6065818 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Hydroprogne, Hydroprogne caspia GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Hydroprogne, Hydroprogne caspia GBIF ID: 2481236 NCBI |
17 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Larus, Larus argentatus GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Larus, Larus argentatus GBIF ID: 2481139 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Larus, Larus californicus GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Larus, Larus californicus GBIF ID: 2481146 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Larus, Larus canus GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Larus, Larus canus GBIF ID: 6178148 Animalia, Chordata, Aves, Charadriiformes, Laridae, Larus, Larus canus GBIF ID: 7982160 NCBI |
22 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Larus, Larus fuscus GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Larus, Larus fuscus GBIF ID: 2481174 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Larus, Larus glaucescens GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Larus, Larus glaucescens GBIF ID: 2481196 NCBI |
8 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Larus, Larus glaucoides GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Larus, Larus glaucoides GBIF ID: 9509445 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Larus, Larus heermanni GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Larus, Larus heermanni GBIF ID: 2481130 NCBI |
28 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Larus, Larus hyperboreus GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Larus, Larus hyperboreus GBIF ID: 2481127 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Larus, Larus occidentalis GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Larus, Larus occidentalis GBIF ID: 9656686 NCBI |
50 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Larus, Larus smithsonianus GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Larus, Larus smithsonianus GBIF ID: 6178141 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Rissa, Rissa tridactyla GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Rissa, Rissa tridactyla GBIF ID: 9454939 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Rynchops, Rynchops niger GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Rynchops, Rynchops niger GBIF ID: 2481209 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Sterna, Sterna forsteri GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Sterna, Sterna forsteri GBIF ID: 5229247 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Sterna, Sterna hirundo GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Sterna, Sterna hirundo GBIF ID: 9367409 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Sterna, Sterna maxima GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Sterna, Sterna maxima GBIF ID: 5789281 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Thalasseus, Thalasseus elegans GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Thalasseus, Thalasseus elegans GBIF ID: 2481285 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Laridae, Xema, Xema sabini GBIFAnimalia, Chordata, Aves, Charadriiformes, Laridae, Xema, Xema sabini GBIF ID: 2481221 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Actitis, Actitis macularia GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Actitis, Actitis macularia GBIF ID: 2481798 NCBI |
14 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Aphriza, Aphriza virgata GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Aphriza, Aphriza virgata GBIF ID: 7964835 NCBI |
13 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Arenaria, Arenaria interpres GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Arenaria, Arenaria interpres GBIF ID: 2481776 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Arenaria, Arenaria melanocephala GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Arenaria, Arenaria melanocephala GBIF ID: 5229406 NCBI |
31 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Calidris, Calidris alba GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Calidris, Calidris alba GBIF ID: 2481748 NCBI |
28 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Calidris, Calidris alpina GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Calidris, Calidris alpina GBIF ID: 2481759 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Calidris, Calidris bairdii GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Calidris, Calidris bairdii GBIF ID: 2481770 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Calidris, Calidris mauri GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Calidris, Calidris mauri GBIF ID: 2481742 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Calidris, Calidris melanotos GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Calidris, Calidris melanotos GBIF ID: 2481744 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Calidris, Calidris minutilla GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Calidris, Calidris minutilla GBIF ID: 2481745 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Calidris, Calidris pusilla GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Calidris, Calidris pusilla GBIF ID: 2481764 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Catoptrophorus, Catoptrophorus semipalmatus GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Catoptrophorus, Catoptrophorus semipalmatus GBIF ID: 5789298 Animalia, Chordata, Aves, Charadriiformes, Scolopacidae, Catoptrophorus, Catoptrophorus semipalmatus GBIF ID: 6065965 NCBI |
31 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Limnodromus, Limnodromus griseus GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Limnodromus, Limnodromus griseus GBIF ID: 2481672 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Limosa, Limosa fedoa GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Limosa, Limosa fedoa GBIF ID: 2481684 NCBI |
16 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Numenius, Numenius phaeopus GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Numenius, Numenius phaeopus GBIF ID: 2481784 NCBI |
20 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Phalaropus, Phalaropus fulicarius GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Phalaropus, Phalaropus fulicarius GBIF ID: 5229390 NCBI |
8 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Phalaropus, Phalaropus lobatus GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Phalaropus, Phalaropus lobatus GBIF ID: 5739290 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Scolopacidae, Tringa, Tringa incana GBIFAnimalia, Chordata, Aves, Charadriiformes, Scolopacidae, Tringa, Tringa incana GBIF ID: 9733156 NCBI |
12 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Charadriiformes, Stercorariidae, Stercorarius, Stercorarius parasiticus GBIFAnimalia, Chordata, Aves, Charadriiformes, Stercorariidae, Stercorarius, Stercorarius parasiticus GBIF ID: 2481621 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Columbiformes, Columbidae, Columba, Columba livia GBIFAnimalia, Chordata, Aves, Columbiformes, Columbidae, Columba, Columba livia GBIF ID: 2495414 Animalia, Chordata, Aves, Columbiformes, Columbidae, Columba, Columba livia GBIF ID: 9310871 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Columbiformes, Columbidae, Patagioenas, Patagioenas fasciata GBIFAnimalia, Chordata, Aves, Columbiformes, Columbidae, Patagioenas, Patagioenas fasciata GBIF ID: 2495266 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Columbiformes, Columbidae, Streptopelia, Streptopelia decaocto GBIFAnimalia, Chordata, Aves, Columbiformes, Columbidae, Streptopelia, Streptopelia decaocto GBIF ID: 2495696 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Coraciiformes, Alcedinidae, Megaceryle, Megaceryle alcyon GBIFAnimalia, Chordata, Aves, Coraciiformes, Alcedinidae, Megaceryle, Megaceryle alcyon GBIF ID: 2475472 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Reptilia, Falconiformes, Falconidae, Falco, Falco peregrinus GBIFAnimalia, Chordata, Aves, Falconiformes, Falconidae, Falco, Falco peregrinus GBIF ID: 2481047 Animalia, Chordata, Aves, Falconiformes, Falconidae, Falco, Falco peregrinus GBIF ID: 6177976 NCBI |
2 |