To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
Pillar Point
GBIF Taxonomic Comparison
To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
GBIF unique order: 156
GBIF unique order with NCBI ID: 156
GBIF unique order with eDNA match: 103
Taxon | GBIF Occurences | NCBI Match | eDNA Match |
---|---|---|---|
Normalized Taxa
Eukaryota, Animalia, Nemertea, Anopla, Heteronemertea GBIFGBIF ID: NULL NCBIEukaryota, Metazoa, Nemertea, Anopla, Heteronemertea NCBI ID: 6219, CALeDNA page |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Nemertea, Enopla, Monostilifera GBIFAnimalia, Nemertea, Enopla, Monostilifera GBIF ID: 5967468 NCBIEukaryota, Metazoa, Nemertea, Enopla, Monostilifera NCBI ID: 6227, CALeDNA page |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Platyhelminthes, Polycladidea, Polycladida GBIFAnimalia, Platyhelminthes, Rhabditophora, Polycladida GBIF ID: 429 NCBIEukaryota, Metazoa, Platyhelminthes, --, Polycladida NCBI ID: 6163, CALeDNA page |
23 | ||
Normalized Taxa
Eukaryota, Animalia, Porifera, Calcarea, Leucosolenida GBIFAnimalia, Porifera, Calcarea, Leucosolenida GBIF ID: 1184 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Porifera, Demospongiae, Dendroceratida GBIFAnimalia, Porifera, Demospongiae, Dendroceratida GBIF ID: 1238 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Porifera, Demospongiae, Hadromerida GBIFAnimalia, Porifera, Demospongiae, Clionaida GBIF ID: 7431046 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Porifera, Demospongiae, Halichondrida GBIFAnimalia, Porifera, Demospongiae, Suberitida GBIF ID: 7682289 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Porifera, Demospongiae, Haplosclerida GBIFAnimalia, Porifera, Demospongiae, Haplosclerida GBIF ID: 1239 NCBIEukaryota, Metazoa, Porifera, Demospongiae, Haplosclerida NCBI ID: 6049, CALeDNA page |
10 | ||
Normalized Taxa
Eukaryota, Animalia, Sipuncula, Phascolosomatidea, Phascolosomatiformes GBIFAnimalia, Sipuncula, Phascolosomatidea, Phascolosomatiformes GBIF ID: 1155 NCBIEukaryota, Metazoa, Annelida, Polychaeta, Phascolosomatiformes NCBI ID: 216210, CALeDNA page |
14 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Desmarestiales GBIFChromista, Ochrophyta, Phaeophyceae, Desmarestiales GBIF ID: 559 NCBIEukaryota, --, Phaeophyceae, --, Desmarestiales NCBI ID: 31337, CALeDNA page |
8 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Ectocarpales GBIFChromista, Ochrophyta, Phaeophyceae, Ectocarpales GBIF ID: 1181 Chromista, Ochrophyta, Phaeophyceae, Scytosiphonales GBIF ID: 1309 NCBIEukaryota, --, Phaeophyceae, --, Ectocarpales NCBI ID: 2877, CALeDNA page |
20 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Fucales GBIFChromista, Ochrophyta, Phaeophyceae, Fucales GBIF ID: 1182 NCBIEukaryota, --, Phaeophyceae, --, Fucales NCBI ID: 3009, CALeDNA page |
27 | ||
Normalized Taxa
Eukaryota, Chromista, Ochrophyta, Phaeophyceae, Laminariales GBIFChromista, Ochrophyta, Phaeophyceae, Laminariales GBIF ID: 560 NCBIEukaryota, --, Phaeophyceae, --, Laminariales NCBI ID: 2886, CALeDNA page |
252 | ||
Normalized Taxa
Eukaryota, Fungi, Ascomycota, Lecanoromycetes, Lecanorales GBIFFungi, Ascomycota, Lecanoromycetes, Lecanorales GBIF ID: 1048 NCBIEukaryota, Fungi, Ascomycota, Lecanoromycetes, Lecanorales NCBI ID: 5197, CALeDNA page |
10 | ||
Normalized Taxa
Eukaryota, Fungi, Ascomycota, Lecanoromycetes, Peltigerales GBIFFungi, Ascomycota, Lecanoromycetes, Peltigerales GBIF ID: 1055 NCBIEukaryota, Fungi, Ascomycota, Lecanoromycetes, Peltigerales NCBI ID: 388450, CALeDNA page |
3 | ||
Normalized Taxa
Eukaryota, Fungi, Basidiomycota, Agaricomycetes, Agaricales GBIFFungi, Basidiomycota, Agaricomycetes, Agaricales GBIF ID: 1499 NCBIEukaryota, Fungi, Basidiomycota, Agaricomycetes, Agaricales NCBI ID: 5338, CALeDNA page |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Chlorophyta, Ulvophyceae, Bryopsidales GBIFPlantae, Chlorophyta, Ulvophyceae, Bryopsidales GBIF ID: 625 NCBIEukaryota, Viridiplantae, Chlorophyta, Ulvophyceae, Bryopsidales NCBI ID: 33104, CALeDNA page |
4 | ||
Normalized Taxa
Eukaryota, Plantae, Chlorophyta, Ulvophyceae, Cladophorales GBIFPlantae, Chlorophyta, Ulvophyceae, Cladophorales GBIF ID: 1362 NCBIEukaryota, Viridiplantae, Chlorophyta, Ulvophyceae, Cladophorales NCBI ID: 3183, CALeDNA page |
19 | ||
Normalized Taxa
Eukaryota, Plantae, Chlorophyta, Ulvophyceae, Ulotrichales GBIFPlantae, Chlorophyta, Ulvophyceae, Ulotrichales GBIF ID: 1356 NCBIEukaryota, Viridiplantae, Chlorophyta, Ulvophyceae, Ulotrichales NCBI ID: 31306, CALeDNA page |
7 | ||
Normalized Taxa
Eukaryota, Plantae, Chlorophyta, Ulvophyceae, Ulvales GBIFPlantae, Chlorophyta, Ulvophyceae, Ulvales GBIF ID: 641 NCBIEukaryota, Viridiplantae, Chlorophyta, Ulvophyceae, Ulvales NCBI ID: 3113, CALeDNA page |
11 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Bangiophyceae, Bangiales GBIFPlantae, Rhodophyta, Bangiophyceae, Bangiales GBIF ID: 1389 NCBIEukaryota, --, --, Bangiophyceae, Bangiales NCBI ID: 29216, CALeDNA page |
3 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Compsopogonophyceae, Erythropeltidales GBIFPlantae, Rhodophyta, Compsopogonophyceae, Erythropeltidales GBIF ID: 660 NCBIEukaryota, --, --, Compsopogonophyceae, Erythropeltidales NCBI ID: 31351, CALeDNA page |
15 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Ceramiales GBIFPlantae, Rhodophyta, Florideophyceae, Ceramiales GBIF ID: 665 NCBIEukaryota, --, --, Florideophyceae, Ceramiales NCBI ID: 2802, CALeDNA page |
90 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Corallinales GBIFPlantae, Rhodophyta, Florideophyceae, Corallinales GBIF ID: 670 NCBIEukaryota, --, --, Florideophyceae, Corallinales NCBI ID: 31395, CALeDNA page |
8 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Gigartinales GBIFPlantae, Rhodophyta, Florideophyceae, Gigartinales GBIF ID: 1400 GBIF ID: NULL NCBIEukaryota, --, --, Florideophyceae, Gigartinales NCBI ID: 28017, CALeDNA page |
125 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Gracilariales GBIFPlantae, Rhodophyta, Florideophyceae, Gracilariales GBIF ID: 1401 NCBIEukaryota, --, --, Florideophyceae, Gracilariales NCBI ID: 31468, CALeDNA page |
3 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Halymeniales GBIFPlantae, Rhodophyta, Florideophyceae, Halymeniales GBIF ID: 1402 NCBIEukaryota, --, --, Florideophyceae, Halymeniales NCBI ID: 50289, CALeDNA page |
7 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Nemaliales GBIFPlantae, Rhodophyta, Florideophyceae, Nemaliales GBIF ID: 673 NCBIEukaryota, --, --, Florideophyceae, Nemaliales NCBI ID: 2807, CALeDNA page |
7 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Palmariales GBIFPlantae, Rhodophyta, Florideophyceae, Palmariales GBIF ID: 1403 NCBIEukaryota, --, --, Florideophyceae, Palmariales NCBI ID: 2819, CALeDNA page |
66 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Plocamiales GBIFPlantae, Rhodophyta, Florideophyceae, Plocamiales GBIF ID: 1404 NCBIEukaryota, --, --, Florideophyceae, Plocamiales NCBI ID: 35203, CALeDNA page |
7 | ||
Normalized Taxa
Eukaryota, Plantae, Rhodophyta, Florideophyceae, Rhodymeniales GBIFPlantae, Rhodophyta, Florideophyceae, Rhodymeniales GBIF ID: 676 NCBIEukaryota, --, --, Florideophyceae, Rhodymeniales NCBI ID: 29247, CALeDNA page |
18 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Alismatales GBIFPlantae, Tracheophyta, Liliopsida, Alismatales GBIF ID: 551 NCBIEukaryota, Viridiplantae, Streptophyta, Liliopsida, Alismatales NCBI ID: 16360, CALeDNA page |
34 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Apiales GBIFPlantae, Tracheophyta, Magnoliopsida, Apiales GBIF ID: 1351 NCBIEukaryota, Viridiplantae, Streptophyta, --, Apiales NCBI ID: 4036, CALeDNA page |
14 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asparagales GBIFPlantae, Tracheophyta, Liliopsida, Asparagales GBIF ID: 1169 NCBIEukaryota, Viridiplantae, Streptophyta, Liliopsida, Asparagales NCBI ID: 73496, CALeDNA page |
6 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Asterales GBIFPlantae, Tracheophyta, Magnoliopsida, Asterales GBIF ID: 414 NCBIEukaryota, Viridiplantae, Streptophyta, --, Asterales NCBI ID: 4209, CALeDNA page |
93 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Boraginales GBIFPlantae, Tracheophyta, Magnoliopsida, Boraginales GBIF ID: 7226464 NCBIEukaryota, Viridiplantae, Streptophyta, --, Boraginales NCBI ID: 1538097, CALeDNA page |
4 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Brassicales GBIFPlantae, Tracheophyta, Magnoliopsida, Brassicales GBIF ID: 7225535 NCBIEukaryota, Viridiplantae, Streptophyta, --, Brassicales NCBI ID: 3699, CALeDNA page |
21 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Caryophyllales GBIFPlantae, Tracheophyta, Magnoliopsida, Caryophyllales GBIF ID: 422 NCBIEukaryota, Viridiplantae, Streptophyta, --, Caryophyllales NCBI ID: 3524, CALeDNA page |
38 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Cucurbitales GBIFPlantae, Tracheophyta, Magnoliopsida, Cucurbitales GBIF ID: 7224005 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Dipsacales GBIFPlantae, Tracheophyta, Magnoliopsida, Dipsacales GBIF ID: 946 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Ericales GBIFPlantae, Tracheophyta, Magnoliopsida, Ericales GBIF ID: 1353 NCBIEukaryota, Viridiplantae, Streptophyta, --, Ericales NCBI ID: 41945, CALeDNA page |
3 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Fabales GBIFPlantae, Tracheophyta, Magnoliopsida, Fabales GBIF ID: 1370 NCBIEukaryota, Viridiplantae, Streptophyta, --, Fabales NCBI ID: 72025, CALeDNA page |
23 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Geraniales GBIFPlantae, Tracheophyta, Magnoliopsida, Geraniales GBIF ID: 624 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Lamiales GBIFPlantae, Tracheophyta, Magnoliopsida, Lamiales GBIF ID: 408 NCBI |
32 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Malvales GBIFPlantae, Tracheophyta, Magnoliopsida, Malvales GBIF ID: 941 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Myrtales GBIFPlantae, Tracheophyta, Magnoliopsida, Myrtales GBIF ID: 690 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Oxalidales GBIFPlantae, Tracheophyta, Magnoliopsida, Oxalidales GBIF ID: 7224021 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Poales GBIFPlantae, Tracheophyta, Liliopsida, Poales GBIF ID: 1369 NCBIEukaryota, Viridiplantae, Streptophyta, Liliopsida, Poales NCBI ID: 38820, CALeDNA page |
13 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Ranunculales GBIFPlantae, Tracheophyta, Magnoliopsida, Ranunculales GBIF ID: 399 NCBIEukaryota, Viridiplantae, Streptophyta, --, Ranunculales NCBI ID: 41768, CALeDNA page |
6 | ||
Normalized Taxa
Eukaryota, Plantae, Tracheophyta, Magnoliopsida, Rosales GBIFPlantae, Tracheophyta, Magnoliopsida, Rosales GBIF ID: 691 NCBI |
8 |