To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
Pillar Point
GBIF Taxonomic Comparison
To find out how eDNA complements GBIF data, we looked at whether or not there was a eDNA match for each GBIF taxa. While eDNA and GBIF have a high match rate at the higher taxonomic levels (phylum, class, order), there is low match rate at lower taxonomic levels (genus and species).
GBIF unique species: 726
GBIF unique species with NCBI ID: 622
GBIF unique species with eDNA match: 48
Taxon | GBIF Occurences | NCBI Match | eDNA Match |
---|---|---|---|
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Belliidae, Lophopanopeus, Lophopanopeus bellus GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Belliidae, Lophopanopeus, Lophopanopeus bellus GBIF ID: 2227680 NCBI |
8 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Callianassidae, Neotrypaea, Neotrypaea californiensis GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Callianassidae, Neotrypaea, Neotrypaea californiensis GBIF ID: 2222882 NCBIEukaryota, Metazoa, Arthropoda, Malacostraca, Decapoda, Callianassidae, Neotrypaea, Neotrypaea californiensis NCBI ID: 177238, CALeDNA page |
11 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Dacryopilumnidae, Pachygrapsus, Pachygrapsus crassipes GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Dacryopilumnidae, Pachygrapsus, Pachygrapsus crassipes GBIF ID: 2225812 NCBI |
63 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Dromiidae, Cancer, Cancer productus GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Dromiidae, Cancer, Cancer productus GBIF ID: 2222079 NCBI |
54 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Dromiidae, Metacarcinus, Metacarcinus gracilis GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Dromiidae, Metacarcinus, Metacarcinus gracilis GBIF ID: 5863761 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Dromiidae, Metacarcinus, Metacarcinus magister GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Dromiidae, Metacarcinus, Metacarcinus magister GBIF ID: 5863764 NCBI |
5 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Dromiidae, Romaleon, Romaleon antennarium GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Dromiidae, Romaleon, Romaleon antennarium GBIF ID: 5970317 NCBI |
85 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Dromiidae, Romaleon, Romaleon jordani GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Dromiidae, Romaleon, Romaleon jordani GBIF ID: 5970316 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Galatheidae, Pleuroncodes, Pleuroncodes planipes GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Galatheidae, Pleuroncodes, Pleuroncodes planipes GBIF ID: 2222707 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Hippidae, Emerita, Emerita analoga GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Hippidae, Emerita, Emerita analoga GBIF ID: 2225698 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Hippolytidae, Heptacarpus, Heptacarpus brevirostris GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Hippolytidae, Heptacarpus, Heptacarpus brevirostris GBIF ID: 2226466 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Hippolytidae, Heptacarpus, Heptacarpus sitchensis GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Hippolytidae, Heptacarpus, Heptacarpus sitchensis GBIF ID: 2226455 NCBI |
4 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Hippolytidae, Spirontocaris, Spirontocaris prionota GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Hippolytidae, Spirontocaris, Spirontocaris prionota GBIF ID: 2226314 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Lithodidae, Lopholithodes, Lopholithodes foraminatus GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Lithodidae, Lopholithodes, Lopholithodes foraminatus GBIF ID: 2224375 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Ocypodidae, Pugettia, Pugettia gracilis GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Ocypodidae, Pugettia, Pugettia gracilis GBIF ID: 2226673 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Ocypodidae, Pugettia, Pugettia producta GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Ocypodidae, Pugettia, Pugettia producta GBIF ID: 2226672 NCBI |
105 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Ocypodidae, Pugettia, Pugettia richii GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Ocypodidae, Pugettia, Pugettia richii GBIF ID: 2226675 NCBI |
12 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Paguridae, Pagurus, Pagurus granosimanus GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Paguridae, Pagurus, Pagurus granosimanus GBIF ID: 2224248 NCBI |
24 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Paguridae, Pagurus, Pagurus hirsutiusculus GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Paguridae, Pagurus, Pagurus hirsutiusculus GBIF ID: 2224219 NCBI |
11 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Paguridae, Pagurus, Pagurus samuelis GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Paguridae, Pagurus, Pagurus samuelis GBIF ID: 2224230 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Paguridae, Phimochirus, Phimochirus californiensis GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Paguridae, Phimochirus, Phimochirus californiensis GBIF ID: 2224142 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Porcellanidae, Pachycheles, Pachycheles rudis GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Porcellanidae, Pachycheles, Pachycheles rudis GBIF ID: 2222724 NCBI |
15 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Porcellanidae, Petrolisthes, Petrolisthes cinctipes GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Porcellanidae, Petrolisthes, Petrolisthes cinctipes GBIF ID: 2222718 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Porcellanidae, Petrolisthes, Petrolisthes eriomerus GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Porcellanidae, Petrolisthes, Petrolisthes eriomerus GBIF ID: 2222713 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Porcellanidae, Petrolisthes, Petrolisthes manimaculis GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Porcellanidae, Petrolisthes, Petrolisthes manimaculis GBIF ID: 2222715 NCBI |
17 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Pseudothelphusidae, Hemigrapsus, Hemigrapsus nudus GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Pseudothelphusidae, Hemigrapsus, Hemigrapsus nudus GBIF ID: 2225773 NCBI |
15 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Decapoda, Pseudothelphusidae, Hemigrapsus, Hemigrapsus oregonensis GBIFAnimalia, Arthropoda, Malacostraca, Decapoda, Pseudothelphusidae, Hemigrapsus, Hemigrapsus oregonensis GBIF ID: 2225774 NCBI |
8 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Isopoda, Arcturidae, Idarcturus, Idarcturus hedgpethi GBIFAnimalia, Arthropoda, Malacostraca, Isopoda, Arcturidae, Idarcturus, Idarcturus hedgpethi GBIF ID: 2199220 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Isopoda, Idoteidae, Idotea, Idotea urotoma GBIFAnimalia, Arthropoda, Malacostraca, Isopoda, Idoteidae, Idotea, Idotea urotoma GBIF ID: 5176223 NCBI |
7 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Isopoda, Idoteidae, Pentidotea, Pentidotea stenops GBIFAnimalia, Arthropoda, Malacostraca, Isopoda, Idoteidae, Pentidotea, Pentidotea stenops GBIF ID: 5176292 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Isopoda, Idoteidae, Pentidotea, Pentidotea wosnesenskii GBIFAnimalia, Arthropoda, Malacostraca, Isopoda, Idoteidae, Pentidotea, Pentidotea wosnesenskii GBIF ID: 2204885 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Malacostraca, Isopoda, Ligiidae, Ligia, Ligia occidentalis GBIFAnimalia, Arthropoda, Malacostraca, Isopoda, Ligiidae, Ligia, Ligia occidentalis GBIF ID: 5175619 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Lepadiformes, Lepadidae, Lepas, Lepas fascicularis GBIFAnimalia, Arthropoda, Maxillopoda, Pedunculata, Lepadidae, Lepas, Lepas fascicularis GBIF ID: 2113862 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Lepadiformes, Lepadidae, Lepas, Lepas pacifica GBIFAnimalia, Arthropoda, Maxillopoda, Pedunculata, Lepadidae, Lepas, Lepas pacifica GBIF ID: 5166340 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Scalpelliformes, Pollicipedidae, Pollicipes, Pollicipes polymerus GBIFAnimalia, Arthropoda, Maxillopoda, Pedunculata, Pollicipedidae, Pollicipes, Pollicipes polymerus GBIF ID: 2113807 NCBI |
66 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Sessilia, Archaeobalanidae, Semibalanus, Semibalanus cariosus GBIFAnimalia, Arthropoda, Maxillopoda, Sessilia, Archaeobalanidae, Semibalanus, Semibalanus cariosus GBIF ID: 2115787 NCBI |
13 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Sessilia, Balanidae, Balanus, Balanus aquila GBIFAnimalia, Arthropoda, Maxillopoda, Sessilia, Balanidae, Balanus, Balanus aquila GBIF ID: 2115689 NCBI |
2 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Sessilia, Balanidae, Balanus, Balanus glandula GBIFAnimalia, Arthropoda, Maxillopoda, Sessilia, Balanidae, Balanus, Balanus glandula GBIF ID: 2115706 NCBI |
11 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Sessilia, Balanidae, Balanus, Balanus nubilus GBIFAnimalia, Arthropoda, Maxillopoda, Sessilia, Balanidae, Balanus, Balanus nubilus GBIF ID: 2115695 NCBI |
13 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Sessilia, Balanidae, Megabalanus, Megabalanus californicus GBIFAnimalia, Arthropoda, Maxillopoda, Sessilia, Balanidae, Megabalanus, Megabalanus californicus GBIF ID: 5166486 NCBI |
12 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Sessilia, Chthamalidae, Chthamalus, Chthamalus dalli GBIFAnimalia, Arthropoda, Maxillopoda, Sessilia, Chthamalidae, Chthamalus, Chthamalus dalli GBIF ID: 2115614 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Maxillopoda, Sessilia, Tetraclitidae, Tetraclita, Tetraclita rubescens GBIFAnimalia, Arthropoda, Maxillopoda, Sessilia, Tetraclitidae, Tetraclita, Tetraclita rubescens GBIF ID: 2115806 NCBI |
100 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Pycnogonida, Pantopoda, Ammotheidae, Ammothea, Ammothea hilgendorfi GBIFAnimalia, Arthropoda, Pycnogonida, Pantopoda, Ammotheidae, Ammothea, Ammothea hilgendorfi GBIF ID: 5166760 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Arthropoda, Pycnogonida, Pantopoda, Pycnogonidae, Pycnogonum, Pycnogonum stearnsi GBIFAnimalia, Arthropoda, Pycnogonida, Pantopoda, Pycnogonidae, Pycnogonum, Pycnogonum stearnsi GBIF ID: 2117238 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Animalia, Bryozoa, Gymnolaemata, Cheilostomata, Eurystomellidae, Integripelta, Integripelta bilabiata GBIFAnimalia, Bryozoa, Gymnolaemata, Cheilostomatida, Eurystomellidae, Integripelta, Integripelta bilabiata GBIF ID: 1009898 NCBI |
30 | ||
Normalized Taxa
Eukaryota, Animalia, Bryozoa, Gymnolaemata, Cheilostomata, Membraniporidae, Membranipora, Membranipora membranacea GBIFAnimalia, Bryozoa, Gymnolaemata, Cheilostomatida, Membraniporidae, Membranipora, Membranipora membranacea GBIF ID: 1007770 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Bryozoa, Gymnolaemata, Cheilostomata, Watersiporidae, Watersipora, Watersipora cucullata GBIFAnimalia, Bryozoa, Gymnolaemata, Cheilostomatida, Watersiporidae, Watersipora, Watersipora cucullata GBIF ID: 1005675 NCBI |
3 | ||
Normalized Taxa
Eukaryota, Animalia, Bryozoa, Gymnolaemata, Cheilostomata, Watersiporidae, Watersipora, Watersipora subtorquata GBIFAnimalia, Bryozoa, Gymnolaemata, Cheilostomatida, Watersiporidae, Watersipora, Watersipora subtorquata GBIF ID: 1005677 NCBI |
6 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Amphibia, Caudata, Ambystomatidae, Dicamptodon, Dicamptodon ensatus GBIFAnimalia, Chordata, Amphibia, Caudata, Ambystomatidae, Dicamptodon, Dicamptodon ensatus GBIF ID: 2432020 NCBI |
1 | ||
Normalized Taxa
Eukaryota, Animalia, Chordata, Amphibia, Caudata, Plethodontidae, Batrachoseps, Batrachoseps attenuatus GBIFAnimalia, Chordata, Amphibia, Caudata, Plethodontidae, Batrachoseps, Batrachoseps attenuatus GBIF ID: 2431750 NCBI |
7 |